Basic Information | |||
Gene ID | ENSDARG00000089610 | ||
Gene Name | pbx1a | ||
Full Name | Uncharacterized protein | ||
Organism | Danio rerio [7955] |
Cross Reference | |||
UniProt | F1QTD6 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
ENSEMBL | |||
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSDARP00000068437 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 146 | 214 | 5.70e-32 | Homeodomain-like |
ENSDARP00000068437 | Pfam | PF00046 | IPR001356 | 147 | 206 | 5.60e-19 | Homeobox domain |
ENSDARP00000068437 | Pfam | PF03792 | IPR005542 | 1 | 145 | 1.50e-72 | PBX |
ENSDARP00000068437 | ProSitePatterns | PS00027 | IPR017970 | 182 | 205 | - | Homeobox, conserved site |
ENSDARP00000068437 | ProSiteProfiles | PS50071 | IPR001356 | 144 | 207 | 0.00e-00 | Homeobox domain |
ENSDARP00000068437 | SMART | SM00389 | IPR001356 | 146 | 211 | 1.90e-19 | Homeobox domain |
ENSDARP00000068437 | SUPERFAMILY | SSF46689 | IPR009057 | 146 | 216 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSDARP00000068437 | PF03792 | 0 | PBC | PBC domain |
ENSDARP00000068437 | PF00046 | 2.6e-19 | Homeobox | Homeobox domain |
ENSDARP00000068437 | PF05920 | 2.1e-15 | Homeobox_KN | Homeobox KN domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSDARP00000068437 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSDARP00000068437 | GO:0045944 | biological_process | positive regulation of transcription from RNA polymerase II promoter |
ENSDARP00000068437 | GO:0005634 | cellular_component | nucleus |
ENSDARP00000068437 | GO:0005667 | cellular_component | transcription factor complex |
ENSDARP00000068437 | GO:0003677 | molecular_function | DNA binding |
ENSDARP00000068437 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
ENSDARP00000068437 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
7463 | Apis florea | 100864773 | 10141 | Cavia porcellus | ENSCPOG00000005958 |
9796 | Equus caballus | ENSECAG00000013058 | 9685 | Felis catus | ENSFCAG00000005533 |
9305 | Sarcophilus harrisii | ENSSHAG00000012750 | 9823 | Sus scrofa | ENSSSCG00000006331 |
8083 | Xiphophorus maculatus | ENSXMAG00000016285 | 9103 | Meleagris gallopavo | ENSMGAG00000003669 |
59463 | Myotis lucifugus | ENSMLUG00000006941 | 9986 | Oryctolagus cuniculus | ENSOCUG00000007609 |
59729 | Taeniopygia guttata | ENSTGUG00000017317 | 99883 | Tetraodon nigroviridis | ENSTNIG00000006548 |
Paralogs | |||
30728 | 570960 | ENSDARG00000089262 | ENSDARG00000091547 |