Basic Information | |||
Gene ID | ENSSSCG00000009704 | ||
Gene Name | HMGB2 | ||
Full Name | High mobility group protein B2 | ||
Organism | Sus scrofa [9823] |
Cross Reference | |||
UniProt | F1RJ01 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSSSCP00000010363 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 8 | 76 | 9.60e-22 | High mobility group box domain |
ENSSSCP00000010363 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 91 | 165 | 4.70e-31 | High mobility group box domain |
ENSSSCP00000010363 | Pfam | PF00505 | IPR009071 | 93 | 161 | 2.00e-26 | High mobility group box domain |
ENSSSCP00000010363 | Pfam | PF09011 | IPR009071 | 6 | 76 | 1.60e-23 | High mobility group box domain |
ENSSSCP00000010363 | ProSiteProfiles | PS50118 | IPR009071 | 93 | 161 | 0.00e-00 | High mobility group box domain |
ENSSSCP00000010363 | ProSiteProfiles | PS50118 | IPR009071 | 9 | 77 | 0.00e-00 | High mobility group box domain |
ENSSSCP00000010363 | SMART | SM00398 | IPR009071 | 8 | 78 | 4.20e-18 | High mobility group box domain |
ENSSSCP00000010363 | SMART | SM00398 | IPR009071 | 92 | 162 | 1.40e-33 | High mobility group box domain |
ENSSSCP00000010363 | SUPERFAMILY | SSF47095 | IPR009071 | 3 | 80 | 0.00e-00 | High mobility group box domain |
ENSSSCP00000010363 | SUPERFAMILY | SSF47095 | IPR009071 | 77 | 162 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSSSCP00000010363 | PF09011 | 2.5e-40 | HMG_box_2 | HMG-box domain |
ENSSSCP00000010363 | PF00505 | 9.8e-39 | HMG_box | HMG (high mobility group) box |
ENSSSCP00000010363 | PF14887 | 0.00041 | HMG_box_5 | HMG (high mobility group) box 5 |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSSSCP00000010363 | GO:0006288 | biological_process | base-excision repair, DNA ligation |
ENSSSCP00000010363 | GO:0006357 | biological_process | regulation of transcription from RNA polymerase II promoter |
ENSSSCP00000010363 | GO:0000793 | cellular_component | condensed chromosome |
ENSSSCP00000010363 | GO:0005634 | cellular_component | nucleus |
ENSSSCP00000010363 | GO:0003677 | molecular_function | DNA binding |
ENSSSCP00000010363 | GO:0008301 | molecular_function | DNA binding, bending |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
13735 | Pelodiscus sinensis | 102455330 | 9483 | Callithrix jacchus | 100401463 |
9555 | Papio anubis | 100998031 | 10090 | Mus musculus | 97165 |
9361 | Dasypus novemcinctus | ENSDNOG00000019440 | 9371 | Echinops telfairi | ENSETEG00000010379 |
9785 | Loxodonta africana | ENSLAFG00000030388 | 9315 | Macropus eugenii | ENSMEUG00000002256 |
9103 | Meleagris gallopavo | ENSMGAG00000006836 | 59463 | Myotis lucifugus | ENSMLUG00000026303 |
132908 | Pteropus vampyrus | ENSPVAG00000014656 | 9305 | Sarcophilus harrisii | ENSSHAG00000012461 |
Paralogs | |||
100517745 | 445521 | ENSSSCG00000022459 |