Basic Information | |||
Gene ID | ENSTNIG00000007374 | ||
Gene Name | SOX13 | ||
Full Name | Uncharacterized protein | ||
Organism | Tetraodon nigroviridis [99883] |
Cross Reference | |||
UniProt | H3C721 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSTNIP00000004042 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 431 | 511 | 3.10e-33 | High mobility group box domain |
ENSTNIP00000004042 | Pfam | PF00505 | IPR009071 | 432 | 500 | 3.90e-22 | High mobility group box domain |
ENSTNIP00000004042 | ProSiteProfiles | PS50118 | IPR009071 | 432 | 500 | 0.00e-00 | High mobility group box domain |
ENSTNIP00000004042 | SMART | SM00398 | IPR009071 | 431 | 501 | 6.00e-30 | High mobility group box domain |
ENSTNIP00000004042 | SUPERFAMILY | SSF47095 | IPR009071 | 420 | 504 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSTNIP00000004042 | PF00505 | 3.9e-22 | HMG_box | HMG (high mobility group) box |
ENSTNIP00000004042 | PF09011 | 2.6e-09 | HMG_box_2 | HMG-box domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSTNIP00000004042 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSTNIP00000004042 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSTNIP00000004042 | GO:0005634 | cellular_component | nucleus |
ENSTNIP00000004042 | GO:0003677 | molecular_function | DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
10029 | Cricetulus griseus | 100763409 | 9305 | Sarcophilus harrisii | 100929833 |
9597 | Pan paniscus | 100985471 | 39432 | Saimiri boliviensis | 101036035 |
9595 | Gorilla gorilla | 101128642 | 13735 | Pelodiscus sinensis | 102443850 |
10090 | Mus musculus | 20668 | 9606 | Homo sapiens | 9580 |
28377 | Anolis carolinensis | ENSACAG00000010028 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000000885 |
9913 | Bos taurus | ENSBTAG00000008132 | 9615 | Canis familiaris | ENSCAFG00000009614 |
7955 | Danio rerio | ENSDARG00000030297 | 10020 | Dipodomys ordii | ENSDORG00000003409 |
9796 | Equus caballus | ENSECAG00000012249 | 9365 | Erinaceus europaeus | ENSEEUG00000000993 |
9031 | Gallus gallus | ENSGALG00000000583 | 8049 | Gadus morhua | ENSGMOG00000004316 |
7897 | Latimeria chalumnae | ENSLACG00000008711 | 9315 | Macropus eugenii | ENSMEUG00000005847 |
13616 | Monodelphis domestica | ENSMODG00000001192 | 9986 | Oryctolagus cuniculus | ENSOCUG00000023464 |
9978 | Ochotona princeps | ENSOPRG00000001274 | 8090 | Oryzias latipes | ENSORLG00000012066 |
9813 | Procavia capensis | ENSPCAG00000015953 | 9601 | Pongo abelii | ENSPPYG00000000324 |
132908 | Pteropus vampyrus | ENSPVAG00000013711 | 9103 | Meleagris gallopavo | 100541790 |
9555 | Papio anubis | 101018744 | 9669 | Mustela putorius furo | 101692916 |
43179 | Ictidomys tridecemlineatus | 101962309 | 9544 | Macaca mulatta | 700802 |
10141 | Cavia porcellus | ENSCPOG00000006604 | 9371 | Echinops telfairi | ENSETEG00000007298 |
9685 | Felis catus | ENSFCAG00000002900 | 69293 | Gasterosteus aculeatus | ENSGACG00000010931 |
9785 | Loxodonta africana | ENSLAFG00000015918 | 59463 | Myotis lucifugus | ENSMLUG00000016734 |
30611 | Otolemur garnettii | ENSOGAG00000011880 | 8128 | Oreochromis niloticus | ENSONIG00000020233 |
9598 | Pan troglodytes | ENSPTRG00000001881 | 9823 | Sus scrofa | ENSSSCG00000015277 |
59729 | Taeniopygia guttata | ENSTGUG00000002931 | 9739 | Tursiops truncatus | ENSTTRG00000008767 |
8083 | Xiphophorus maculatus | ENSXMAG00000008855 | 31033 | Takifugu rubripes | ENSTRUG00000000156 |
9478 | Tarsius syrichta | ENSTSYG00000012536 |
Paralogs | |||
ENSTNIG00000004906 | ENSTNIG00000006928 | ENSTNIG00000009384 |