Basic Information | |||
Gene ID | ENSTRUG00000016703 | ||
Gene Name | LHX6 | ||
Full Name | Uncharacterized protein | ||
Organism | Takifugu rubripes [31033] |
Cross Reference | |||
UniProt | H2V0L0 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
ENSEMBL | |||
ENSEMBL | |||
ENSEMBL | |||
ENSEMBL | |||
ENSEMBL | |||
ENSEMBL | |||
ENSEMBL | |||
ENSEMBL | |||
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSTRUP00000042740 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 159 | 226 | 1.30e-24 | Homeodomain-like |
ENSTRUP00000042740 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 15 | 83 | 1.20e-15 | Zinc finger, LIM-type |
ENSTRUP00000042740 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 84 | 135 | 7.40e-15 | Zinc finger, LIM-type |
ENSTRUP00000042740 | Pfam | PF00038 | IPR001664 | 340 | 419 | 2.50e-15 | Intermediate filament protein |
ENSTRUP00000042740 | Pfam | PF00038 | IPR001664 | 432 | 529 | 2.60e-21 | Intermediate filament protein |
ENSTRUP00000042740 | Pfam | PF00046 | IPR001356 | 169 | 225 | 5.30e-19 | Homeobox domain |
ENSTRUP00000042740 | Pfam | PF00412 | IPR001781 | 19 | 76 | 1.90e-13 | Zinc finger, LIM-type |
ENSTRUP00000042740 | Pfam | PF00412 | IPR001781 | 80 | 134 | 1.00e-15 | Zinc finger, LIM-type |
ENSTRUP00000042740 | ProSitePatterns | PS00027 | IPR017970 | 201 | 224 | - | Homeobox, conserved site |
ENSTRUP00000042740 | ProSitePatterns | PS00478 | IPR001781 | 19 | 53 | - | Zinc finger, LIM-type |
ENSTRUP00000042740 | ProSitePatterns | PS00478 | IPR001781 | 80 | 115 | - | Zinc finger, LIM-type |
ENSTRUP00000042740 | ProSiteProfiles | PS50023 | IPR001781 | 17 | 77 | 0.00e-00 | Zinc finger, LIM-type |
ENSTRUP00000042740 | ProSiteProfiles | PS50023 | IPR001781 | 78 | 140 | 0.00e-00 | Zinc finger, LIM-type |
ENSTRUP00000042740 | ProSiteProfiles | PS50071 | IPR001356 | 166 | 226 | 0.00e-00 | Homeobox domain |
ENSTRUP00000042740 | SMART | SM00132 | IPR001781 | 18 | 71 | 1.70e-12 | Zinc finger, LIM-type |
ENSTRUP00000042740 | SMART | SM00132 | IPR001781 | 79 | 133 | 7.50e-20 | Zinc finger, LIM-type |
ENSTRUP00000042740 | SMART | SM00389 | IPR001356 | 168 | 230 | 4.30e-25 | Homeobox domain |
ENSTRUP00000042740 | SUPERFAMILY | SSF46689 | IPR009057 | 158 | 225 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSTRUP00000042740 | PF00038 | 5.6e-37 | Filament | Intermediate filament protein |
ENSTRUP00000042740 | PF00412 | 1e-29 | LIM | LIM domain |
ENSTRUP00000042740 | PF00046 | 2.4e-19 | Homeobox | Homeobox domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSTRUP00000042740 | GO:0005634 | cellular_component | nucleus |
ENSTRUP00000042740 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
ENSTRUP00000042740 | GO:0008270 | molecular_function | zinc ion binding |
ENSTRUP00000042740 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
8128 | Oreochromis niloticus | 100700223 | 6239 | Caenorhabditis elegans | 180672 |
69293 | Gasterosteus aculeatus | ENSGACG00000013917 | 8049 | Gadus morhua | ENSGMOG00000013688 |
8090 | Oryzias latipes | ENSORLG00000000498 | 99883 | Tetraodon nigroviridis | ENSTNIG00000015588 |
8083 | Xiphophorus maculatus | ENSXMAG00000003235 |
Paralogs | |||
101069278 | ENSTRUG00000000957 |