Basic Information
Gene ID GSOIDP00001901001
Gene Name Prdm5
Full Name PR domain zinc finger protein 5
Organism Oikopleura dioica [34765]

Cross Reference
UniProt NULL UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

InterPro Annotation
Protein Program Term IPRS Start End Score Description
GSOIDP00001901001 Gene3D G3DSA:3.30.160.60 IPR013087 402 432 7.90e-07 Zinc finger C2H2-type/integrase DNA-binding domain
GSOIDP00001901001 Gene3D G3DSA:3.30.160.60 IPR013087 290 313 5.60e-04 Zinc finger C2H2-type/integrase DNA-binding domain
GSOIDP00001901001 Gene3D G3DSA:3.30.160.60 IPR013087 378 401 6.90e-12 Zinc finger C2H2-type/integrase DNA-binding domain
GSOIDP00001901001 Gene3D G3DSA:3.30.160.60 IPR013087 219 243 5.90e-08 Zinc finger C2H2-type/integrase DNA-binding domain
GSOIDP00001901001 Gene3D G3DSA:3.30.160.60 IPR013087 317 344 8.40e-04 Zinc finger C2H2-type/integrase DNA-binding domain
GSOIDP00001901001 Gene3D G3DSA:3.30.160.60 IPR013087 189 218 9.10e-04 Zinc finger C2H2-type/integrase DNA-binding domain
GSOIDP00001901001 Gene3D G3DSA:3.30.160.60 IPR013087 351 377 6.60e-08 Zinc finger C2H2-type/integrase DNA-binding domain
GSOIDP00001901001 ProSitePatterns PS00028 IPR007087 292 315 - Zinc finger, C2H2
GSOIDP00001901001 ProSitePatterns PS00028 IPR007087 219 241 - Zinc finger, C2H2
GSOIDP00001901001 ProSitePatterns PS00028 IPR007087 77 98 - Zinc finger, C2H2
GSOIDP00001901001 ProSitePatterns PS00028 IPR007087 266 288 - Zinc finger, C2H2
GSOIDP00001901001 ProSitePatterns PS00028 IPR007087 323 344 - Zinc finger, C2H2
GSOIDP00001901001 ProSitePatterns PS00028 IPR007087 191 212 - Zinc finger, C2H2
GSOIDP00001901001 ProSitePatterns PS00028 IPR007087 381 403 - Zinc finger, C2H2
GSOIDP00001901001 ProSitePatterns PS00028 IPR007087 440 461 - Zinc finger, C2H2
GSOIDP00001901001 ProSitePatterns PS00028 IPR007087 352 373 - Zinc finger, C2H2
GSOIDP00001901001 ProSitePatterns PS00028 IPR007087 411 431 - Zinc finger, C2H2
GSOIDP00001901001 ProSiteProfiles PS50157 IPR007087 379 408 1.19e+01 Zinc finger, C2H2
GSOIDP00001901001 ProSiteProfiles PS50157 IPR007087 290 320 1.02e+01 Zinc finger, C2H2
GSOIDP00001901001 ProSiteProfiles PS50157 IPR007087 217 244 8.81e+00 Zinc finger, C2H2
GSOIDP00001901001 ProSiteProfiles PS50157 IPR007087 438 471 8.91e+00 Zinc finger, C2H2
GSOIDP00001901001 ProSiteProfiles PS50157 IPR007087 409 431 9.47e+00 Zinc finger, C2H2
GSOIDP00001901001 ProSiteProfiles PS50157 IPR007087 350 378 1.24e+01 Zinc finger, C2H2
GSOIDP00001901001 ProSiteProfiles PS50157 IPR007087 190 212 9.37e+00 Zinc finger, C2H2
GSOIDP00001901001 ProSiteProfiles PS50157 IPR007087 321 349 1.11e+01 Zinc finger, C2H2
GSOIDP00001901001 SMART SM00355 IPR015880 160 184 3.50e+01 Zinc finger, C2H2-like
GSOIDP00001901001 SMART SM00355 IPR015880 75 98 1.10e-01 Zinc finger, C2H2-like
GSOIDP00001901001 SMART SM00355 IPR015880 438 461 2.50e-01 Zinc finger, C2H2-like
GSOIDP00001901001 SMART SM00355 IPR015880 321 344 3.40e-01 Zinc finger, C2H2-like
GSOIDP00001901001 SMART SM00355 IPR015880 350 373 6.40e-02 Zinc finger, C2H2-like
GSOIDP00001901001 SMART SM00355 IPR015880 290 315 7.80e-03 Zinc finger, C2H2-like
GSOIDP00001901001 SMART SM00355 IPR015880 190 212 1.30e-01 Zinc finger, C2H2-like
GSOIDP00001901001 SMART SM00355 IPR015880 379 403 9.60e-02 Zinc finger, C2H2-like
GSOIDP00001901001 SMART SM00355 IPR015880 409 431 2.50e-01 Zinc finger, C2H2-like
GSOIDP00001901001 SMART SM00355 IPR015880 264 288 1.90e+00 Zinc finger, C2H2-like
GSOIDP00001901001 SMART SM00355 IPR015880 217 241 5.30e-02 Zinc finger, C2H2-like
GSOIDP00001901001 SMART SM00451 IPR003604 214 248 8.00e-03 Zinc finger, U1-type

Pfam Annotation
Protein Pfam ID E.value Name Description
GSOIDP00001901001 PF13894 7.3e-23 zf-C2H2_4 C2H2-type zinc finger
GSOIDP00001901001 PF00096 9.9e-19 zf-C2H2 Zinc finger, C2H2 type
GSOIDP00001901001 PF13465 2.1e-14 zf-H2C2_2 Zinc-finger double domain
GSOIDP00001901001 PF15909 2.2e-05 zf-C2H2_8 C2H2-type zinc ribbon
GSOIDP00001901001 PF12171 0.00021 zf-C2H2_jaz Zinc-finger double-stranded RNA-binding

Gene Ontology Annotation
Protein Entry Name Space Description
GSOIDP00001901001 GO:0006355 biological_process regulation of transcription, DNA-templated
GSOIDP00001901001 GO:0006351 biological_process transcription, DNA-templated
GSOIDP00001901001 GO:0005634 cellular_component nucleus
GSOIDP00001901001 GO:0003677 molecular_function DNA binding
GSOIDP00001901001 GO:0046872 molecular_function metal ion binding