Basic Information
Gene ID GSOIDP00005866001
Gene Name Hmgb3
Full Name High mobility group protein B3
Organism Oikopleura dioica [34765]

Cross Reference
UniProt NULL UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

InterPro Annotation
Protein Program Term IPRS Start End Score Description
GSOIDP00005866001 Gene3D G3DSA:1.10.30.10 IPR009071 225 270 1.40e-18 High mobility group box domain
GSOIDP00005866001 Gene3D G3DSA:1.10.30.10 IPR009071 151 188 1.40e-18 High mobility group box domain
GSOIDP00005866001 Gene3D G3DSA:1.10.30.10 IPR009071 69 127 3.20e-14 High mobility group box domain
GSOIDP00005866001 Pfam PF09011 IPR009071 69 128 7.20e-13 High mobility group box domain
GSOIDP00005866001 Pfam PF00505 IPR009071 229 270 1.00e-07 High mobility group box domain
GSOIDP00005866001 ProSiteProfiles PS50118 IPR009071 153 270 1.38e+01 High mobility group box domain
GSOIDP00005866001 ProSiteProfiles PS50118 IPR009071 68 138 1.18e+01 High mobility group box domain
GSOIDP00005866001 SMART SM00398 IPR009071 67 139 5.60e-10 High mobility group box domain
GSOIDP00005866001 SMART SM00398 IPR009071 152 271 8.30e-13 High mobility group box domain
GSOIDP00005866001 SUPERFAMILY SSF47095 IPR009071 227 273 5.28e-12 High mobility group box domain
GSOIDP00005866001 SUPERFAMILY SSF47095 IPR009071 152 177 5.28e-12 High mobility group box domain
GSOIDP00005866001 SUPERFAMILY SSF47095 IPR009071 63 128 3.53e-15 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
GSOIDP00005866001 PF09011 4.3e-23 HMG_box_2 HMG-box domain
GSOIDP00005866001 PF00505 4.7e-23 HMG_box HMG (high mobility group) box
GSOIDP00005866001 PF06382 0.0002 DUF1074 Protein of unknown function (DUF1074)

Gene Ontology Annotation
Protein Entry Name Space Description
GSOIDP00005866001 GO:0032392 biological_process DNA geometric change
GSOIDP00005866001 GO:0006351 biological_process transcription, DNA-templated
GSOIDP00005866001 GO:0006355 biological_process regulation of transcription, DNA-templated
GSOIDP00005866001 GO:0045087 biological_process innate immune response
GSOIDP00005866001 GO:0005634 cellular_component nucleus
GSOIDP00005866001 GO:0005694 cellular_component chromosome
GSOIDP00005866001 GO:0005737 cellular_component cytoplasm
GSOIDP00005866001 GO:0008301 molecular_function DNA binding, bending
GSOIDP00005866001 GO:0000400 molecular_function four-way junction DNA binding