Basic Information
Gene ID GSOIDP00006999001
Gene Name Lmx1b
Full Name LIM homeobox transcription factor 1-beta
Organism Oikopleura dioica [34765]

Cross Reference
UniProt NULL UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

InterPro Annotation
Protein Program Term IPRS Start End Score Description
GSOIDP00006999001 Gene3D G3DSA:2.10.110.10 IPR001781 61 123 8.80e-11 Zinc finger, LIM-type
GSOIDP00006999001 Gene3D G3DSA:1.10.10.60 IPR009057 239 300 3.90e-20 Homeodomain-like
GSOIDP00006999001 Gene3D G3DSA:2.10.110.10 IPR001781 3 59 1.10e-10 Zinc finger, LIM-type
GSOIDP00006999001 Pfam PF00412 IPR001781 64 122 3.60e-09 Zinc finger, LIM-type
GSOIDP00006999001 Pfam PF00412 IPR001781 5 58 1.00e-09 Zinc finger, LIM-type
GSOIDP00006999001 Pfam PF00046 IPR001356 238 294 5.80e-17 Homeobox domain
GSOIDP00006999001 ProSitePatterns PS00027 IPR017970 270 293 - Homeobox, conserved site
GSOIDP00006999001 ProSitePatterns PS00478 IPR001781 5 40 - Zinc finger, LIM-type
GSOIDP00006999001 ProSitePatterns PS00478 IPR001781 64 99 - Zinc finger, LIM-type
GSOIDP00006999001 ProSiteProfiles PS50023 IPR001781 3 63 1.16e+01 Zinc finger, LIM-type
GSOIDP00006999001 ProSiteProfiles PS50023 IPR001781 64 125 9.18e+00 Zinc finger, LIM-type
GSOIDP00006999001 ProSiteProfiles PS50071 IPR001356 235 295 1.74e+01 Homeobox domain
GSOIDP00006999001 SMART SM00132 IPR001781 63 118 4.50e-07 Zinc finger, LIM-type
GSOIDP00006999001 SMART SM00132 IPR001781 4 56 4.90e-09 Zinc finger, LIM-type
GSOIDP00006999001 SMART SM00389 IPR001356 237 299 6.60e-20 Homeobox domain
GSOIDP00006999001 SUPERFAMILY SSF46689 IPR009057 226 295 1.24e-18 Homeodomain-like

Pfam Annotation
Protein Pfam ID E.value Name Description
GSOIDP00006999001 PF00412 1.7e-18 LIM LIM domain
GSOIDP00006999001 PF00046 1.2e-17 Homeobox Homeobox domain
GSOIDP00006999001 PF05920 1.9e-05 Homeobox_KN Homeobox KN domain
GSOIDP00006999001 PF13874 0.0015 Nup54 Nucleoporin complex subunit 54
GSOIDP00006999001 PF12773 0.0021 DZR Double zinc ribbon
GSOIDP00006999001 PF00645 0.0024 zf-PARP Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region