Basic Information
Gene ID Harore.CG.MTP2014.S19.g08831.01.t_1
Gene Name PRDM1
Full Name PR domain zinc finger protein 1
Organism Halocynthia roretzi [7729]

Cross Reference
UniProt NULL UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

InterPro Annotation
Protein Program Term IPRS Start End Score Description
Harore.CG.MTP2014.S1 Gene3D G3DSA:3.30.160.60 IPR013087 492 517 5.10e-15 Zinc finger C2H2-type/integrase DNA-binding domain
Harore.CG.MTP2014.S1 Gene3D G3DSA:3.30.160.60 IPR013087 518 545 4.90e-08 Zinc finger C2H2-type/integrase DNA-binding domain
Harore.CG.MTP2014.S1 Gene3D G3DSA:3.30.160.60 IPR013087 472 491 2.90e-14 Zinc finger C2H2-type/integrase DNA-binding domain
Harore.CG.MTP2014.S1 Gene3D G3DSA:3.30.160.60 IPR013087 442 471 6.50e-15 Zinc finger C2H2-type/integrase DNA-binding domain
Harore.CG.MTP2014.S1 Pfam PF13912 IPR007087 498 520 1.40e-06 Zinc finger, C2H2
Harore.CG.MTP2014.S1 Pfam PF13912 IPR007087 441 464 5.50e-04 Zinc finger, C2H2
Harore.CG.MTP2014.S1 ProSitePatterns PS00028 IPR007087 472 492 - Zinc finger, C2H2
Harore.CG.MTP2014.S1 ProSitePatterns PS00028 IPR007087 444 464 - Zinc finger, C2H2
Harore.CG.MTP2014.S1 ProSitePatterns PS00028 IPR007087 500 520 - Zinc finger, C2H2
Harore.CG.MTP2014.S1 ProSiteProfiles PS50157 IPR007087 498 525 1.56e+01 Zinc finger, C2H2
Harore.CG.MTP2014.S1 ProSiteProfiles PS50157 IPR007087 470 497 1.65e+01 Zinc finger, C2H2
Harore.CG.MTP2014.S1 ProSiteProfiles PS50157 IPR007087 442 469 1.61e+01 Zinc finger, C2H2
Harore.CG.MTP2014.S1 SMART SM00355 IPR015880 442 464 2.30e-03 Zinc finger, C2H2-like
Harore.CG.MTP2014.S1 SMART SM00355 IPR015880 470 492 1.60e-03 Zinc finger, C2H2-like
Harore.CG.MTP2014.S1 SMART SM00355 IPR015880 526 546 2.40e+02 Zinc finger, C2H2-like
Harore.CG.MTP2014.S1 SMART SM00355 IPR015880 498 520 2.20e-03 Zinc finger, C2H2-like

Pfam Annotation
Protein Pfam ID E.value Name Description
Harore.CG.MTP2014.S1 PF13465 1.8e-26 zf-H2C2_2 Zinc-finger double domain
Harore.CG.MTP2014.S1 PF00096 6.7e-17 zf-C2H2 Zinc finger, C2H2 type
Harore.CG.MTP2014.S1 PF13912 4.6e-12 zf-C2H2_6 C2H2-type zinc finger
Harore.CG.MTP2014.S1 PF13894 1e-09 zf-C2H2_4 C2H2-type zinc finger
Harore.CG.MTP2014.S1 PF12874 1.3e-05 zf-met Zinc-finger of C2H2 type
Harore.CG.MTP2014.S1 PF12171 0.00045 zf-C2H2_jaz Zinc-finger double-stranded RNA-binding
Harore.CG.MTP2014.S1 PF05605 0.0017 zf-Di19 Drought induced 19 protein (Di19), zinc-binding