Basic Information | |||
Gene ID | Harore.CG.MTP2014.S58.g15284.01.t_1 | ||
Gene Name | Arid4b | ||
Full Name | AT-rich interactive domain-containing protein 4B | ||
Organism | Halocynthia roretzi [7729] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
Harore.CG.MTP2014.S5 | Gene3D | G3DSA:1.10.150.60 | IPR001606 | 339 | 448 | 7.70e-31 | ARID DNA-binding domain |
Harore.CG.MTP2014.S5 | Pfam | PF11717 | IPR025995 | 638 | 692 | 1.80e-10 | RNA binding activity-knot of a chromodomain |
Harore.CG.MTP2014.S5 | Pfam | PF01388 | IPR001606 | 349 | 433 | 5.50e-20 | ARID DNA-binding domain |
Harore.CG.MTP2014.S5 | Pfam | PF08169 | IPR012603 | 202 | 296 | 1.50e-21 | RBB1NT |
Harore.CG.MTP2014.S5 | ProSiteProfiles | PS51011 | IPR001606 | 345 | 437 | 2.88e+01 | ARID DNA-binding domain |
Harore.CG.MTP2014.S5 | SMART | SM00501 | IPR001606 | 346 | 438 | 1.20e-29 | ARID DNA-binding domain |
Harore.CG.MTP2014.S5 | SMART | SM00333 | IPR002999 | 61 | 118 | 3.30e-03 | Tudor domain |
Harore.CG.MTP2014.S5 | SUPERFAMILY | SSF54160 | IPR016197 | 630 | 709 | 1.50e-15 | Chromo domain-like |
Harore.CG.MTP2014.S5 | SUPERFAMILY | SSF46774 | IPR001606 | 339 | 440 | 1.57e-28 | ARID DNA-binding domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
Harore.CG.MTP2014.S5 | PF08169 | 6.4e-24 | RBB1NT | RBB1NT (NUC162) domain |
Harore.CG.MTP2014.S5 | PF01388 | 5.1e-21 | ARID | ARID/BRIGHT DNA binding domain |
Harore.CG.MTP2014.S5 | PF11717 | 8.5e-12 | Tudor-knot | RNA binding activity-knot of a chromodomain |
Harore.CG.MTP2014.S5 | PF08070 | 0.0008 | DTHCT | DTHCT (NUC029) region |