>OMPADOMAIN#OMPA domain signature. Length = 346 Score = 89.6 bits (222), Expect = 4e-24 Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 15/118 (12%) Query: 43 RVFFDYDKSNIIEAGADALLDIIEVLQNN--PDMKVTAIGHTDNRGSYEYNIALGERRAN 100 V F+++K+ + G AL + L N D V +G+TD GS YN L ERRA Sbjct: 220 DVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRAQ 279 Query: 101 AAKKFMVS--CAPHLEGRIKTVSRGEAEPLVYVQDNSKNSKYEKQH-----AKNRRVE 151 + +++S +I GE+ P V N+ ++ ++ A +RRVE Sbjct: 280 SVVDYLISKGIPA---DKISARGMGESNP---VTGNTCDNVKQRAALIDCLAPDRRVE 331
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein signature. Length = 347 Score = 449 bits (1156), Expect = e-161 Identities = 189/345 (54%), Positives = 256/345 (74%), Gaps = 5/345 (1%) Query: 17 FKGLFASDIAIDLGTANTVVYQKNQGIVIDEPSVVARIKEKGSYVPY--AFGKKAKMMLG 74 F+G+F++D++IDLGTANT++Y K QGIV++EPSVVA +++ A G AK MLG Sbjct: 5 FRGMFSNDLSIDLGTANTLIYVKGQGIVLNEPSVVAIRQDRAGSPKSVAAVGHDAKQMLG 64 Query: 75 KTPGEIEAIRPLKDGVIADFRSAEEMLKYFIRSANTKLTVN-KPDIIICVPSGSTPVERR 133 +TPG I AIRP+KDGVIADF E+ML++FI+ ++ + P +++CVP G+T VERR Sbjct: 65 RTPGNIAAIRPMKDGVIADFFVTEKMLQHFIKQVHSNSFMRPSPRVLVCVPVGATQVERR 124 Query: 134 AIQDTAESAGANEVFLIEEPMAAAIGAGLPVTEPEGSMVVDIGGGTTEVAIISLGGIVYS 193 AI+++A+ AGA EVFLIEEPMAAAIGAGLPV+E GSMVVDIGGGTTEVA+ISL G+VYS Sbjct: 125 AIRESAQGAGAREVFLIEEPMAAAIGAGLPVSEATGSMVVDIGGGTTEVAVISLNGVVYS 184 Query: 194 RSARVGGDIMDEAIKSYIRENHKLLIGETTAEKIKKSVGSASLPSENNKEGMMVKGRDLV 253 S R+GGD DEAI +Y+R N+ LIGE TAE+IK +GSA P + +E + V+GR+L Sbjct: 185 SSVRIGGDRFDEAIINYVRRNYGSLIGEATAERIKHEIGSA-YPGDEVRE-IEVRGRNLA 242 Query: 254 SGMPKEVLLSEYQVAESLTESVHQIISAIRTALESTPPELSSDIVDKGIVLSGGGGLLRN 313 G+P+ L+ ++ E+L E + I+SA+ ALE PPEL+SDI ++G+VL+GGG LLRN Sbjct: 243 EGVPRGFTLNSNEILEALQEPLTGIVSAVMVALEQCPPELASDISERGMVLTGGGALLRN 302 Query: 314 LGKVISQITKLPVRVADDPLCCVALGSGKVLENMDYFSHVLFKQD 358 L +++ + T +PV VA+DPL CVA G GK LE +D LF ++ Sbjct: 303 LDRLLMEETGIPVVVAEDPLTCVARGGGKALEMIDMHGGDLFSEE 347
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family signature. Length = 1024 Score = 29.9 bits (67), Expect = 0.035 Identities = 18/67 (26%), Positives = 31/67 (46%) Query: 373 TNTLNNIKQYVQEDNVQEFKELIKKIQKHEREISEAKQEMIKANLRLVVSIAKKYSNRGL 432 T T IK +Q +L Q + + +A ++ A RL++ I K Y +G Sbjct: 3 TITTAQIKSTLQSAKQSAANKLHSAGQSTKDALKKAAEQTRNAGNRLILLIPKDYKGQGS 62 Query: 433 ALLDLIQ 439 +L DL++ Sbjct: 63 SLNDLVR 69
>TYPE4SSCAGX#Type IV secretion system CagX conjugation protein signature. Length = 522 Score = 28.2 bits (62), Expect = 0.020 Identities = 19/72 (26%), Positives = 36/72 (50%) Query: 125 YIAYDKKEEKSKIETEEILPNWIIRSHSYQALFVTIENIVDMYIPESLILKIKEIGEEMT 184 +I K KS + E+ N+ + + YQ T + IVD P+ L + K + +E Sbjct: 94 HIFIQPKSVKSNLMFEKEAVNFALMTRDYQEFLKTKKLIVDAPDPKELEEQKKALEKEKE 153 Query: 185 DQEKSKSNKKEK 196 +E+++ +K+K Sbjct: 154 AKEQAQKAQKDK 165
>TCRTETA#Tetracycline resistance protein signature. Length = 399 Score = 35.2 bits (81), Expect = 5e-04 Identities = 28/140 (20%), Positives = 57/140 (40%), Gaps = 24/140 (17%) Query: 66 IFGYIGDKYGRRKVLLASVILASISSTAIAVIPSAKKIGIFSPILLLVCRIIQGMATGGE 125 + G + D++GRR VLL S+ A++ +A P +L + RI+ G+ TG Sbjct: 62 VLGALSDRFGRRPVLLVSLAGAAVDYAIMATAPFLW--------VLYIGRIVAGI-TGAT 112 Query: 126 TSINSAFLIEHSSDK---KNLGFLGSMKAFSGALGSITCFVMIAVCKKLTGENYEIWGWK 182 ++ A++ + + ++ GF+ + F G + +M Sbjct: 113 GAVAGAYIADITDGDERARHFGFMSACFGFGMVAGPVLGGLMGGF------------SPH 160 Query: 183 LLFYFCSVMGIIGFLTRYII 202 F+ + + + FLT + Sbjct: 161 APFFAAAALNGLNFLTGCFL 180
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature. Length = 261 Score = 58.1 bits (140), Expect = 4e-12 Identities = 64/272 (23%), Positives = 103/272 (37%), Gaps = 37/272 (13%) Query: 1 MTTTLLKNKKGLITGITNKRSIAYGIAKTLLEHGAEL-AITYQNETVKERLLPIATELNV 59 M ++ K ITG + I +A+TL GA + A+ Y E +++ + + E Sbjct: 1 MNAKGIEGKIAFITG--AAQGIGEAVARTLASQGAHIAAVDYNPEKLEKVVSSLKAEARH 58 Query: 60 ELVLSCDVANEGTIDDVFGVIEKKWSTLDFLVHA---IAFSDKSELSNRYVNTSLSNFLN 116 DV + ID++ IE++ +D LV+ + LS+ + S +N Sbjct: 59 AEAFPADVRDSAAIDEITARIEREMGPIDILVNVAGVLRPGLIHSLSDEEWEATFS--VN 116 Query: 117 AMHISCYSFTALAQRAEKMMPN-VGSLLTLSYYGAEKVIPNYNVMGLCKAALEASVKYLA 175 + + F A ++ MM GS++T+ A + KAA K L Sbjct: 117 STGV----FNASRSVSKYMMDRRSGSIVTVGSNPAGVPRTSMAAYASSKAAAVMFTKCLG 172 Query: 176 CDLGPQNIRVNAISAGPIRTLASSGISDFCFISKWNRNNS----------------PLRR 219 +L NIR N +S G T + W N PL++ Sbjct: 173 LELAEYNIRCNIVSPGSTETDMQWSL--------WADENGAEQVIKGSLETFKTGIPLKK 224 Query: 220 NTTIEDIGKAALYLLSDLSSGTTGEILHVDSG 251 DI A L+L+S + T L VD G Sbjct: 225 LAKPSDIADAVLFLVSGQAGHITMHNLCVDGG 256
>MALTOSEBP#Maltose binding protein signature. Length = 396 Score = 29.7 bits (66), Expect = 0.025 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Query: 102 EPHKLLEGILFAGKAINASAAYIYIRGEFYNEYLVLKKALEEAYKEGLIGENACKS 157 +P K G+L AG INA++ + EF YL+ + LE K+ +G A KS Sbjct: 279 QPSKPFVGVLSAG--INAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKS 332
>LCRVANTIGEN#Low calcium response V antigen signature. Length = 326 Score = 27.7 bits (61), Expect = 0.030 Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 13/100 (13%) Query: 9 VFERFSQSNPTPKVELN---YTNHFTL---------LTAIILSARTADRSVNKVTEELFS 56 + F +S+P + EL HF+L L I+ S + +K+ EEL Sbjct: 100 RVKEFLESSPNTQWELRAFMAVMHFSLTADRIDDDILKVIVDSMNHHGDARSKLREELAE 159 Query: 57 IADSPEKILNLGQSELKKHISSIGLYNSKAKNIIKLSKIL 96 + + KI ++ Q+E+ KH+SS G N K+I + K L Sbjct: 160 LT-AELKIYSVIQAEINKHLSSSGTINIHDKSINLMDKNL 198
>PF07675#Cleaved Adhesin Length = 1358 Score = 29.3 bits (65), Expect = 0.048 Identities = 12/34 (35%), Positives = 20/34 (58%) Query: 204 VVDIGMARVATEPGNFDVIVTGNLYGDILSDIMA 237 V + M + TE GN+DV++T + Y ++ I A Sbjct: 294 VATVNMTKQITENGNYDVVITRSNYLPVIKQIQA 327