:: PredictBias ::

A) Input parameters
Genome	NO_TYPE_KPL1824.gb	Threshold dinucleotide bias	2
Threshold codon bias	4	Threshold %GC bias	3
E-value (RPSBlast)	0.05	Genome (non-pathogenic)

B) Compare a potential GI or PAI in related non-pathogenic sp. (phylogenetic tree)
Potential GI or PAI start end
Select Organism

C) Potential GIs and PAIs in NZ_KI515750 (download)

S.No

Start

End

Bias

Virulence

Insertion elements

Prediction

HMPREF1267_RS12705

HMPREF1267_RS06410

Genomic Island

LocusTag	DNBias	CDNBias	%GCBias	Product
HMPREF1267_RS12705	3	35	-5.513921	hypothetical protein
HMPREF1267_RS06315	2	38	-4.788328	hypothetical protein
HMPREF1267_RS06320	2	30	-2.710137	hypothetical protein
HMPREF1267_RS12710	0	23	-1.029018	hypothetical protein
HMPREF1267_RS12715	-1	19	0.575809	hypothetical protein
HMPREF1267_RS12720	1	15	1.367093	ABC transporter permease
HMPREF1267_RS06345	0	15	0.341042	multidrug ABC transporter permease
HMPREF1267_RS06350	1	17	0.107940	ABC transporter ATP-binding protein
HMPREF1267_RS06355	2	21	-0.649872	sugar O-acetyltransferase
HMPREF1267_RS06360	3	20	0.245894	glycosyltransferase
HMPREF1267_RS06365	3	19	0.046399	thioesterase
HMPREF1267_RS06370	4	19	-0.696153	ABC transporter ATP-binding protein
HMPREF1267_RS06375	5	21	-1.294815	ABC transporter ATP-binding protein
HMPREF1267_RS06380	5	23	-2.410753	ABC transporter ATP-binding protein
HMPREF1267_RS06385	5	23	-3.926813	energy-coupling factor transporter transmembrane
HMPREF1267_RS06390	5	26	-6.505092	hypothetical protein
HMPREF1267_RS06395	2	33	-5.570715	IS3 family transposase
HMPREF1267_RS06400	0	37	-5.102899	IS3 family transposase
HMPREF1267_RS12725	-1	36	-5.185535	hypothetical protein
HMPREF1267_RS06410	-2	36	-4.448292	hypothetical protein

HMPREF1267_RS07070

HMPREF1267_RS07120

Genomic Island

LocusTag	DNBias	CDNBias	%GCBias	Product
HMPREF1267_RS07070	2	17	0.049004	DNA-binding protein WhiA
HMPREF1267_RS07075	2	19	-0.180776	hypothetical protein
HMPREF1267_RS07080	1	18	-0.257390	RNase adapter RapZ
HMPREF1267_RS07085	2	18	1.108749	excinuclease ABC subunit UvrC
HMPREF1267_RS07090	1	20	1.094784	hypothetical protein
HMPREF1267_RS07095	1	21	1.942687	6,7-dimethyl-8-ribityllumazine synthase
HMPREF1267_RS07100	1	23	2.720246	bifunctional
HMPREF1267_RS07105	1	24	2.669293	riboflavin synthase
HMPREF1267_RS07110	4	23	2.854105	bifunctional
HMPREF1267_RS07115	2	20	1.856657	ribulose-phosphate 3-epimerase
HMPREF1267_RS07120	2	19	2.025520	MFS transporter

HMPREF1267_RS07315

HMPREF1267_RS12750

Genomic Island

LocusTag	DNBias	CDNBias	%GCBias	Product
HMPREF1267_RS07315	2	17	-2.470152	MBL fold metallo-hydrolase
HMPREF1267_RS07320	3	24	-4.306448	lipid hydroperoxide peroxidase
HMPREF1267_RS07325	2	25	-4.809295	peptidylprolyl isomerase
HMPREF1267_RS07330	3	36	-7.679890	hypothetical protein
HMPREF1267_RS12745	2	36	-7.816835	hypothetical protein
HMPREF1267_RS07335	4	33	-6.515285	transposase
HMPREF1267_RS07340	0	33	-7.375494	hypothetical protein
HMPREF1267_RS12750	-1	17	-3.585213	hypothetical protein

HMPREF1267_RS07700

HMPREF1267_RS07810

Genomic Island

LocusTag	DNBias	CDNBias	%GCBias	Product
HMPREF1267_RS07700	-2	15	3.381993	DeoR/GlpR transcriptional regulator
HMPREF1267_RS07705	-1	15	3.669619	phosphoenolpyruvate--protein phosphotransferase
HMPREF1267_RS07710	-1	17	3.511679	1-phosphofructokinase
HMPREF1267_RS07715	0	18	3.243939	hypothetical protein
HMPREF1267_RS07720	1	17	3.222399	HPr family phosphocarrier protein
HMPREF1267_RS07725	1	17	4.075828	HNH endonuclease
HMPREF1267_RS07730	1	18	4.171657	hypothetical protein
HMPREF1267_RS07735	1	17	4.685083	GTPase HflX
HMPREF1267_RS07740	2	15	4.924880	hypothetical protein
HMPREF1267_RS07745	2	14	5.036051	hypothetical protein
HMPREF1267_RS07750	1	13	5.169960	diaminopimelate epimerase
HMPREF1267_RS07755	1	13	4.016148	tRNA (adenosine(37)-N6)-dimethylallyltransferase
HMPREF1267_RS07760	3	12	3.396968	hypothetical protein
HMPREF1267_RS07765	3	11	1.786709	DUF349 domain-containing protein
HMPREF1267_RS07770	1	10	0.834835	N-acetyltransferase
HMPREF1267_RS07775	1	14	-0.065107	hypothetical protein
HMPREF1267_RS07780	2	15	-0.985342	tRNA (N6-isopentenyl
HMPREF1267_RS07785	4	20	-2.302793	recombination regulator RecX
HMPREF1267_RS07790	2	17	-2.327473	DNA recombination/repair protein RecA
HMPREF1267_RS12765	2	19	-1.650058	DUF3046 domain-containing protein
HMPREF1267_RS07795	3	18	-1.739955	biotin transporter BioY
HMPREF1267_RS07800	3	18	-2.917368	ABC transporter ATP-binding protein
HMPREF1267_RS07805	3	18	-3.178439	energy-coupling factor transporter transmembrane
HMPREF1267_RS07810	0	16	-3.945595	hypothetical protein

HMPREF1267_RS08435

HMPREF1267_RS08660

Genomic Island

LocusTag	DNBias	CDNBias	%GCBias	Product
HMPREF1267_RS08435	2	21	4.079076	protein RarD
HMPREF1267_RS08440	0	20	4.886496	HNH endonuclease
HMPREF1267_RS08445	0	20	5.023903	hypothetical protein
HMPREF1267_RS08450	-1	18	4.429847	RluA family pseudouridine synthase
HMPREF1267_RS08455	1	17	3.969218	signal peptidase II
HMPREF1267_RS08460	0	18	4.513710	hypothetical protein
HMPREF1267_RS08465	-1	13	2.772597	hypothetical protein
HMPREF1267_RS08470	-1	16	1.103335	L-asparaginase
HMPREF1267_RS08475	-3	17	-1.207974	DNA polymerase IV
HMPREF1267_RS08480	-3	23	-3.512910	GntR family transcriptional regulator
HMPREF1267_RS08485	-3	28	-4.647972	MFS transporter
HMPREF1267_RS08490	-2	37	-6.668581	xylulokinase
HMPREF1267_RS08495	-1	35	-6.913827	DeoR/GlpR transcriptional regulator
HMPREF1267_RS08500	-1	33	-6.537310	MFS transporter
HMPREF1267_RS08505	-1	34	-6.569675	mannitol dehydrogenase family protein
HMPREF1267_RS12770	0	37	-6.553071	chlorophyll synthesis pathway protein BchC
HMPREF1267_RS08515	2	41	-7.345709	L-ribulose-5-phosphate 4-epimerase
HMPREF1267_RS08520	3	40	-7.390831	ATPase
HMPREF1267_RS08525	2	18	-3.021012	hypothetical protein
HMPREF1267_RS08530	0	17	-2.831003	hypothetical protein
HMPREF1267_RS08535	0	17	-2.989627	hypothetical protein
HMPREF1267_RS08540	0	17	-1.152305	hypothetical protein
HMPREF1267_RS12775	0	18	0.159175	isoleucine--tRNA ligase
HMPREF1267_RS08550	0	20	0.914105	HNH endonuclease
HMPREF1267_RS08555	4	17	0.304604	hypothetical protein
HMPREF1267_RS08560	3	17	0.957167	DivIVA domain-containing protein
HMPREF1267_RS08565	3	18	2.445106	membrane protein
HMPREF1267_RS08570	2	12	1.832208	DUF552 domain-containing protein
HMPREF1267_RS08575	2	16	3.390391	YggS family pyridoxal phosphate enzyme
HMPREF1267_RS08580	1	15	3.431908	laccase domain-containing protein
HMPREF1267_RS08585	1	17	3.629995	cell division protein FtsZ
HMPREF1267_RS08590	1	19	4.667143	hypothetical protein
HMPREF1267_RS08595	0	18	3.834298	UDP-N-acetylmuramate--L-alanine ligase
HMPREF1267_RS08605	1	18	4.092149	undecaprenyldiphospho-muramoylpentapeptide
HMPREF1267_RS08610	0	17	3.234728	cell division protein FtsW
HMPREF1267_RS08615	0	16	3.291945	UDP-N-acetylmuramoyl-L-alanine--D-glutamate
HMPREF1267_RS08620	0	14	2.182586	phospho-N-acetylmuramoyl-pentapeptide-
HMPREF1267_RS08625	0	13	2.237161	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
HMPREF1267_RS08630	-1	12	1.151533	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
HMPREF1267_RS08635	-1	15	0.142879	penicillin-binding protein 2
HMPREF1267_RS08640	3	23	0.195850	hypothetical protein
HMPREF1267_RS08645	3	23	-0.158403	16S rRNA (cytosine(1402)-N(4))-methyltransferase
HMPREF1267_RS08650	1	18	-0.142352	division/cell wall cluster transcriptional
HMPREF1267_RS08655	1	16	0.151820	DUF3040 domain-containing protein
HMPREF1267_RS08660	2	15	1.394420	hypothetical protein

HMPREF1267_RS08715

HMPREF1267_RS08810

Genomic Island

LocusTag	DNBias	CDNBias	%GCBias	Product
HMPREF1267_RS08715	2	22	-0.951702	ROK family protein
HMPREF1267_RS08720	4	25	-2.055328	glycosyltransferase family 1 protein
HMPREF1267_RS08725	5	29	-2.821133	hypothetical protein
HMPREF1267_RS08730	5	31	-3.004937	endopeptidase
HMPREF1267_RS08735	6	28	-3.719625	IS256 family transposase
HMPREF1267_RS12780	6	30	-2.747297	cytochrome bc complex cytochrome b subunit
HMPREF1267_RS08740	5	33	-2.531515	menaquinol-cytochrome C reductase iron-sulfur
HMPREF1267_RS08745	2	26	-2.343518	cytochrome c
HMPREF1267_RS08750	1	25	-2.256563	heme-copper oxidase subunit III
HMPREF1267_RS08755	-1	22	-2.103852	cytochrome-c oxidase
HMPREF1267_RS08760	-2	18	-0.591253	hypothetical protein
HMPREF1267_RS08765	-3	14	-0.289751	asparagine synthetase B
HMPREF1267_RS08770	-1	16	0.726465	iron-sulfur cluster assembly accessory protein
HMPREF1267_RS08775	0	16	1.383261	DUF3043 domain-containing protein
HMPREF1267_RS08780	2	15	1.012164	hypothetical protein
HMPREF1267_RS08785	0	15	0.821961	branched-chain amino acid aminotransferase
HMPREF1267_RS08790	0	21	-0.357990	leucyl aminopeptidase
HMPREF1267_RS08800	1	23	1.175352	hypothetical protein
HMPREF1267_RS08805	2	25	1.397104	hypothetical protein
HMPREF1267_RS08810	2	24	1.817393	2-oxoglutarate dehydrogenase, E2 component,

HMPREF1267_RS08960

HMPREF1267_RS09040

Genomic Island

LocusTag	DNBias	CDNBias	%GCBias	Product
HMPREF1267_RS08960	-1	30	-4.096583	SURF1 family protein
HMPREF1267_RS08965	2	39	-6.145219	DUF3375 domain-containing protein
HMPREF1267_RS08970	2	43	-7.109643	hypothetical protein
HMPREF1267_RS08975	2	40	-6.868163	hypothetical protein
HMPREF1267_RS08980	2	36	-8.267848	IS256 family transposase
HMPREF1267_RS08985	1	37	-8.666439	hypothetical protein
HMPREF1267_RS08990	2	36	-7.221106	hypothetical protein
HMPREF1267_RS08995	3	39	-8.228050	hypothetical protein
HMPREF1267_RS09005	2	38	-6.225951	hypothetical protein
HMPREF1267_RS09010	4	47	-5.983143	hydroxyacid dehydrogenase
HMPREF1267_RS09015	3	48	-7.007529	ImmA/IrrE family metallo-endopeptidase
HMPREF1267_RS12360	3	43	-6.409723	hypothetical protein
HMPREF1267_RS09025	4	43	-6.718929	hypothetical protein
HMPREF1267_RS09030	4	37	-5.392886	hypothetical protein
HMPREF1267_RS09035	3	21	-2.922098	hypothetical protein
HMPREF1267_RS09040	3	19	-2.864197	*DUF3052 domain-containing protein

HMPREF1267_RS09995

HMPREF1267_RS10140

Genomic Island

LocusTag	DNBias	CDNBias	%GCBias	Product
HMPREF1267_RS09995	0	22	4.731559	DUF3618 domain-containing protein
HMPREF1267_RS10000	0	22	5.073478	thioredoxin-dependent thiol peroxidase
HMPREF1267_RS10005	1	20	4.744180	TetR/AcrR family transcriptional regulator
HMPREF1267_RS10010	0	19	4.722750	HNH endonuclease
HMPREF1267_RS10015	-1	19	4.199707	ATP-dependent dethiobiotin synthetase BioD
HMPREF1267_RS10020	-1	18	3.436856	adenosylmethionine--8-amino-7-oxononanoate
HMPREF1267_RS10025	-1	17	1.802337	SPFH domain-containing protein
HMPREF1267_RS10030	0	23	1.478786	proline iminopeptidase
HMPREF1267_RS10035	-1	22	1.524236	pyruvate formate-lyase 1-activating enzyme
HMPREF1267_RS10040	0	23	0.936382	autonomous glycyl radical cofactor GrcA
HMPREF1267_RS10045	1	24	1.388046	formate C-acetyltransferase
HMPREF1267_RS10050	1	24	1.919342	hypothetical protein
HMPREF1267_RS10055	2	23	2.981400	*hypothetical protein
HMPREF1267_RS10065	0	22	3.409276	DUF3817 domain-containing protein
HMPREF1267_RS10070	0	23	4.074228	non-canonical purine NTP pyrophosphatase
HMPREF1267_RS10075	-1	22	5.868136	ribonuclease PH
HMPREF1267_RS10080	-1	22	5.236994	MBL fold metallo-hydrolase
HMPREF1267_RS10085	-1	21	4.857338	glutamate racemase
HMPREF1267_RS10090	-1	24	4.834253	rhomboid family intramembrane serine protease
HMPREF1267_RS10095	0	21	4.430922	peptidase S58 family protein
HMPREF1267_RS10100	0	20	4.985006	DUF2017 domain-containing protein
HMPREF1267_RS10105	0	17	3.846413	ATP-dependent Clp protease adapter ClpS
HMPREF1267_RS10110	0	17	3.060535	nicotinate phosphoribosyltransferase
HMPREF1267_RS10115	-1	19	2.196425	ATP-dependent DNA helicase
HMPREF1267_RS10120	-1	17	1.996015	hypothetical protein
HMPREF1267_RS10125	1	21	0.029204	phosphoserine phosphatase SerB
HMPREF1267_RS10130	0	20	-1.202955	cytochrome c oxidase subunit I
HMPREF1267_RS10135	1	22	-2.053229	class 1b ribonucleoside-diphosphate reductase
HMPREF1267_RS10140	2	18	-2.770709	FadR family transcriptional regulator

HMPREF1267_RS10365

HMPREF1267_RS10450

Genomic Island

LocusTag	DNBias	CDNBias	%GCBias	Product
HMPREF1267_RS10365	-3	18	3.093851	folate-binding protein YgfZ
HMPREF1267_RS10370	-2	19	2.918954	DUF3073 domain-containing protein
HMPREF1267_RS10375	-2	15	2.884526	phosphoribosylformylglycinamidine cyclo-ligase
HMPREF1267_RS10380	-1	19	3.004089	amidophosphoribosyltransferase
HMPREF1267_RS10385	-1	19	2.695011	hypothetical protein
HMPREF1267_RS10395	-1	10	1.726980	acyl-CoA thioesterase
HMPREF1267_RS10400	1	9	0.965028	L-asparaginase
HMPREF1267_RS10405	1	9	0.420946	DUF4065 domain-containing protein
HMPREF1267_RS10415	-1	24	-3.437912	membrane protein
HMPREF1267_RS10425	-1	38	-6.642503	tellurite resistance protein
HMPREF1267_RS10430	0	43	-7.694538	alpha/beta hydrolase
HMPREF1267_RS10435	2	49	-9.090224	hypothetical protein
HMPREF1267_RS10440	3	51	-8.766200	NAD(P)-dependent oxidoreductase
HMPREF1267_RS10445	2	46	-8.345834	hypothetical protein
HMPREF1267_RS10450	0	21	-3.711604	hypothetical protein

HMPREF1267_RS10545

HMPREF1267_RS10695

Genomic Island

LocusTag	DNBias	CDNBias	%GCBias	Product
HMPREF1267_RS10545	0	20	3.674153	*hypothetical protein
HMPREF1267_RS10555	0	22	5.243626	hypothetical protein
HMPREF1267_RS10560	-2	22	4.473036	trehalose-6-phosphate synthase
HMPREF1267_RS10565	-1	23	5.049125	hypothetical protein
HMPREF1267_RS10570	0	24	4.971491	trehalose-phosphatase
HMPREF1267_RS10575	-1	18	5.136786	hypothetical protein
HMPREF1267_RS10580	-1	17	4.490531	ABC transporter substrate-binding protein
HMPREF1267_RS10585	-1	17	3.276320	hypothetical protein
HMPREF1267_RS10590	-2	15	4.229887	metal ABC transporter permease
HMPREF1267_RS10595	-2	15	4.349256	HNH endonuclease
HMPREF1267_RS10600	-1	13	4.599232	23S rRNA
HMPREF1267_RS10605	-1	19	4.343792	cysteine--tRNA ligase
HMPREF1267_RS10610	1	21	4.206532	2-C-methyl-D-erythritol 2,4-cyclodiphosphate
HMPREF1267_RS10615	1	21	5.400532	2-C-methyl-D-erythritol 4-phosphate
HMPREF1267_RS10620	2	20	4.963356	CarD family transcriptional regulator
HMPREF1267_RS10625	2	20	4.572711	hypothetical protein
HMPREF1267_RS10630	1	20	4.732347	DNA repair protein RadA
HMPREF1267_RS10635	1	19	5.011841	hypothetical protein
HMPREF1267_RS10640	2	21	4.372117	hypothetical protein
HMPREF1267_RS10650	-1	19	3.211655	A/G-specific adenine glycosylase
HMPREF1267_RS10655	-1	19	3.857142	DUF4236 domain-containing protein
HMPREF1267_RS12840	-1	20	3.757614	ATP-dependent Clp protease ATP-binding subunit
HMPREF1267_RS10660	-2	19	3.994683	hypothetical protein
HMPREF1267_RS10665	-1	19	4.249048	MFS transporter
HMPREF1267_RS10670	-1	20	4.021029	GuaB1 family IMP dehydrogenase-related protein
HMPREF1267_RS10675	-1	17	3.682537	hypothetical protein
HMPREF1267_RS10680	0	13	1.696068	phytoene desaturase
HMPREF1267_RS10685	-1	9	1.070926	lysine--tRNA ligase
HMPREF1267_RS10690	0	14	-0.072712	hypothetical protein
HMPREF1267_RS12845	2	28	-2.513433	hypothetical protein
HMPREF1267_RS12850	2	29	-2.142344	ABC transporter ATP-binding protein
HMPREF1267_RS10695	2	30	-2.668122	iron ABC transporter permease

HMPREF1267_RS10755

HMPREF1267_RS10835

Genomic Island

LocusTag	DNBias	CDNBias	%GCBias	Product
HMPREF1267_RS10755	1	14	3.056213	hypothetical protein
HMPREF1267_RS10760	2	18	3.672495	hypothetical protein
HMPREF1267_RS10765	1	21	4.190162	DUF3180 domain-containing protein
HMPREF1267_RS10770	0	22	3.954529	2-amino-4-hydroxy-6-
HMPREF1267_RS10775	0	22	3.308772	dihydroneopterin aldolase
HMPREF1267_RS10780	0	18	4.099637	dihydropteroate synthase
HMPREF1267_RS10785	-1	19	4.515476	GTP cyclohydrolase I FolE
HMPREF1267_RS10790	-1	19	3.809202	hypothetical protein
HMPREF1267_RS10795	0	20	3.646057	hypoxanthine phosphoribosyltransferase
HMPREF1267_RS10800	1	21	3.960648	tRNA(Ile)-lysidine synthetase
HMPREF1267_RS10805	0	22	5.222579	D-alanyl-D-alanine
HMPREF1267_RS10810	1	24	5.275119	inorganic pyrophosphatase
HMPREF1267_RS10815	1	25	5.227267	DUF559 domain-containing protein
HMPREF1267_RS10820	1	24	5.413793	ABC transporter permease
HMPREF1267_RS10825	3	26	5.877888	ABC transporter ATP-binding protein
HMPREF1267_RS10830	2	24	6.376203	two-component sensor histidine kinase
HMPREF1267_RS10835	-1	17	3.887931	DNA-binding response regulator

HMPREF1267_RS10880

HMPREF1267_RS12860

Genomic Island

LocusTag	DNBias	CDNBias	%GCBias	Product
HMPREF1267_RS10880	1	20	3.024165	oligopeptide transporter, OPT family
HMPREF1267_RS10885	1	20	2.978281	dipeptidase
HMPREF1267_RS10890	2	19	2.158809	Na+/H+ antiporter subunit A
HMPREF1267_RS10895	1	18	2.091988	Na(+)/H(+) antiporter subunit C
HMPREF1267_RS10900	0	17	1.934217	Na+/H+ antiporter subunit D
HMPREF1267_RS10905	-1	15	2.183763	Na+/H+ antiporter subunit E
HMPREF1267_RS10910	-2	15	2.660713	hypothetical protein
HMPREF1267_RS10915	-2	16	3.000925	cation:proton antiporter
HMPREF1267_RS10920	-1	18	3.874185	DUF2029 domain-containing protein
HMPREF1267_RS10925	1	18	3.464634	glutamate--cysteine ligase
HMPREF1267_RS10930	1	21	2.550317	hypothetical protein
HMPREF1267_RS10935	0	22	1.607338	DUF3263 domain-containing protein
HMPREF1267_RS10940	0	22	1.945281	peptide deformylase
HMPREF1267_RS10945	-1	20	2.232221	GNAT family N-acetyltransferase
HMPREF1267_RS10950	-2	19	1.591118	exodeoxyribonuclease III
HMPREF1267_RS10955	-1	21	1.953524	cardiolipin synthase
HMPREF1267_RS10960	-2	17	3.284928	ABC transporter permease
HMPREF1267_RS10965	-1	17	3.125467	ABC transporter ATP-binding protein
HMPREF1267_RS10970	0	20	3.243749	NUDIX domain-containing protein
HMPREF1267_RS10975	0	22	3.013091	hypothetical protein
HMPREF1267_RS10980	0	20	3.180515	hypothetical protein
HMPREF1267_RS10985	-1	19	3.098780	serine/threonine protein kinase
HMPREF1267_RS10990	0	22	2.695705	acetate kinase
HMPREF1267_RS10995	-2	20	2.489252	phosphate acetyltransferase
HMPREF1267_RS11000	-1	15	-0.629006	pyridine nucleotide-disulfide oxidoreductase
HMPREF1267_RS11005	0	22	-1.888763	formate-dependent phosphoribosylglycinamide
HMPREF1267_RS12860	1	21	-3.005594	hypothetical protein

HMPREF1267_RS11070

HMPREF1267_RS11205

Genomic Island

LocusTag	DNBias	CDNBias	%GCBias	Product
HMPREF1267_RS11070	-2	15	3.341446	ATP-dependent chaperone ClpB
HMPREF1267_RS11075	-2	18	3.598532	hypothetical protein
HMPREF1267_RS11080	-1	18	3.760613	NAD(P)/FAD-dependent oxidoreductase
HMPREF1267_RS11085	-2	19	4.438765	hypothetical protein
HMPREF1267_RS11090	-3	20	4.673712	hypothetical protein
HMPREF1267_RS11095	-3	17	4.374405	hypothetical protein
HMPREF1267_RS11100	-1	14	3.717409	hypothetical protein
HMPREF1267_RS11105	-2	13	3.468378	aldehyde dehydrogenase
HMPREF1267_RS11110	0	15	2.454861	hypothetical protein
HMPREF1267_RS11115	2	22	1.336489	molecular chaperone DnaJ
HMPREF1267_RS11120	2	20	1.872645	nucleotide exchange factor GrpE
HMPREF1267_RS11125	2	20	1.236398	molecular chaperone DnaK
HMPREF1267_RS11130	5	18	-0.900135	hypothetical protein
HMPREF1267_RS11135	4	19	0.399532	hypothetical protein
HMPREF1267_RS11140	1	15	0.580506	DNA-binding response regulator
HMPREF1267_RS11145	1	14	-0.404174	hypothetical protein
HMPREF1267_RS11150	1	14	-1.355082	hypothetical protein
HMPREF1267_RS11155	2	15	-1.664398	AI-2E family transporter
HMPREF1267_RS11160	1	16	-2.919782	fimbrial isopeptide formation D2
HMPREF1267_RS11165	1	25	-5.488989	class C sortase
HMPREF1267_RS11170	2	31	-6.897166	hypothetical protein
HMPREF1267_RS11180	1	39	-7.607332	VWA domain-containing protein
HMPREF1267_RS11190	1	37	-6.900883	hypothetical protein
HMPREF1267_RS11195	2	25	-4.436533	hypothetical protein
HMPREF1267_RS11205	1	20	-3.122581	hypothetical protein

HMPREF1267_RS11315

HMPREF1267_RS11950

Genomic Island

LocusTag	DNBias	CDNBias	%GCBias	Product
HMPREF1267_RS11315	3	23	-1.464198	hypothetical protein
HMPREF1267_RS11325	3	25	-0.737404	hypothetical protein
HMPREF1267_RS11330	4	26	0.307065	hypothetical protein
HMPREF1267_RS11335	5	24	0.513331	hypothetical protein
HMPREF1267_RS11340	6	24	1.103436	hypothetical protein
HMPREF1267_RS11345	5	22	0.634535	hypothetical protein
HMPREF1267_RS12380	5	25	0.580855	hypothetical protein
HMPREF1267_RS11355	4	28	0.732052	hypothetical protein
HMPREF1267_RS11360	3	30	0.627488	hypothetical protein
HMPREF1267_RS11365	3	32	0.632691	hypothetical protein
HMPREF1267_RS11370	1	28	-0.175719	hypothetical protein
HMPREF1267_RS11375	1	28	-0.339470	hypothetical protein
HMPREF1267_RS11385	2	25	-0.354745	hypothetical protein
HMPREF1267_RS12385	2	23	-0.600003	tape measure domain-containing protein
HMPREF1267_RS11400	1	23	-0.695832	hypothetical protein
HMPREF1267_RS11405	7	24	-1.113392	hypothetical protein
HMPREF1267_RS11415	3	22	-0.125455	hypothetical protein
HMPREF1267_RS11420	3	22	0.260318	hypothetical protein
HMPREF1267_RS11425	3	23	0.216116	hypothetical protein
HMPREF1267_RS11430	4	23	0.323232	hypothetical protein
HMPREF1267_RS11435	4	22	0.429348	hypothetical protein
HMPREF1267_RS11440	4	23	0.135999	hypothetical protein
HMPREF1267_RS11445	5	26	0.466529	phage portal protein
HMPREF1267_RS11450	3	26	0.108704	PBSX family phage terminase large subunit
HMPREF1267_RS11455	3	34	-0.543813	hypothetical protein
HMPREF1267_RS11460	2	48	-1.512317	hypothetical protein
HMPREF1267_RS11465	3	38	-2.636697	hypothetical protein
HMPREF1267_RS11470	4	39	-2.506011	thymidylate synthase (FAD)
HMPREF1267_RS11475	4	38	-3.021247	hypothetical protein
HMPREF1267_RS11480	4	33	-3.693239	DUF3310 domain-containing protein
HMPREF1267_RS11485	5	30	-2.535922	class 1b ribonucleoside-diphosphate reductase
HMPREF1267_RS11490	6	32	-2.278410	hypothetical protein
HMPREF1267_RS11495	7	37	-1.167114	hypothetical protein
HMPREF1267_RS11505	4	36	-1.958267	hypothetical protein
HMPREF1267_RS11510	4	42	-1.916167	hypothetical protein
HMPREF1267_RS11515	6	36	-0.838377	hypothetical protein
HMPREF1267_RS11520	5	35	-1.409289	hypothetical protein
HMPREF1267_RS11525	4	37	-1.691058	hypothetical protein
HMPREF1267_RS11530	3	38	-2.609180	hypothetical protein
HMPREF1267_RS11535	3	28	-1.344252	hypothetical protein
HMPREF1267_RS11540	5	29	0.396788	hypothetical protein
HMPREF1267_RS11545	4	28	-0.188316	hypothetical protein
HMPREF1267_RS11550	3	25	-0.369722	hypothetical protein
HMPREF1267_RS11555	3	27	-0.514963	hypothetical protein
HMPREF1267_RS11560	2	28	-0.549902	hypothetical protein
HMPREF1267_RS11565	2	30	-0.922607	single-stranded DNA-binding protein
HMPREF1267_RS11570	4	39	-1.955522	hypothetical protein
HMPREF1267_RS11575	3	42	-2.031128	hypothetical protein
HMPREF1267_RS11580	5	49	-2.844371	hypothetical protein
HMPREF1267_RS11585	5	51	-2.868354	hypothetical protein
HMPREF1267_RS11590	5	48	-2.960063	hypothetical protein
HMPREF1267_RS11595	6	42	-3.925575	hypothetical protein
HMPREF1267_RS11605	3	41	-6.785691	hypothetical protein
HMPREF1267_RS11610	1	43	-8.511247	hypothetical protein
HMPREF1267_RS11615	1	42	-8.884850	hypothetical protein
HMPREF1267_RS11620	0	37	-6.158898	hypothetical protein
HMPREF1267_RS11625	0	38	-5.929149	hypothetical protein
HMPREF1267_RS11630	1	35	-3.845506	hypothetical protein
HMPREF1267_RS11635	3	35	-3.515902	hypothetical protein
HMPREF1267_RS11640	3	30	-1.190473	DNA cytosine methyltransferase
HMPREF1267_RS11645	4	27	-1.165481	hypothetical protein
HMPREF1267_RS11650	4	31	-4.094815	hypothetical protein
HMPREF1267_RS11655	3	30	-2.869788	hypothetical protein
HMPREF1267_RS11660	2	28	-3.131142	hypothetical protein
HMPREF1267_RS11665	2	30	-3.157498	transcriptional regulator
HMPREF1267_RS12390	2	25	-2.996398	HNH endonuclease
HMPREF1267_RS12395	0	28	-2.680467	hypothetical protein
HMPREF1267_RS11685	1	28	-1.684822	hypothetical protein
HMPREF1267_RS11690	0	33	-2.103114	DNA-binding protein
HMPREF1267_RS11695	1	34	-3.069022	XRE family transcriptional regulator
HMPREF1267_RS11705	2	36	-4.820633	site-specific integrase
HMPREF1267_RS11710	4	38	-6.123177	hypothetical protein
HMPREF1267_RS11715	4	37	-6.780187	hypothetical protein
HMPREF1267_RS11720	4	37	-6.958408	histidine kinase
HMPREF1267_RS11725	4	37	-6.832335	DNA-binding response regulator
HMPREF1267_RS11730	3	38	-7.411299	ribbon-helix-helix protein, CopG family
HMPREF1267_RS11740	4	41	-8.176064	hypothetical protein
HMPREF1267_RS11745	0	25	-5.819779	hypothetical protein
HMPREF1267_RS11750	-1	17	-2.868705	hypothetical protein
HMPREF1267_RS12875	-1	14	-1.515677	beta-N-acetylglucosaminidase
HMPREF1267_RS11755	-1	15	-1.324109	universal stress protein
HMPREF1267_RS11760	0	16	2.951401	DUF2613 domain-containing protein
HMPREF1267_RS11765	2	19	3.981822	DUF3367 domain-containing protein
HMPREF1267_RS11770	2	20	4.442852	acyltransferase
HMPREF1267_RS11775	2	19	4.798581	DUF3068 domain-containing protein
HMPREF1267_RS11780	3	19	4.557386	hypothetical protein
HMPREF1267_RS11785	3	19	4.628397	glycosyltransferase family 1 protein
HMPREF1267_RS11790	3	17	3.673688	SAM-dependent methyltransferase
HMPREF1267_RS11795	2	16	2.924907	CPBP family intramembrane metalloprotease
HMPREF1267_RS11800	1	18	3.798783	hypothetical protein
HMPREF1267_RS11805	1	18	2.149288	hypothetical protein
HMPREF1267_RS11810	-1	20	1.764316	arginine deiminase
HMPREF1267_RS11815	1	18	0.093760	amino acid permease
HMPREF1267_RS12880	2	18	-0.522236	PTS ascorbate transporter subunit IIC
HMPREF1267_RS12885	1	22	1.128380	hypothetical protein
HMPREF1267_RS11825	1	19	1.025582	Fic family protein
HMPREF1267_RS11830	1	15	0.194652	exonuclease
HMPREF1267_RS11835	3	18	-1.350508	dihydrodipicolinate synthase family protein
HMPREF1267_RS12890	3	22	-2.170605	ROK family protein
HMPREF1267_RS11840	3	22	-2.099438	N-acetylmannosamine-6-phosphate 2-epimerase
HMPREF1267_RS11845	3	32	-3.005050	FadR family transcriptional regulator
HMPREF1267_RS11850	3	34	-3.068433	SSS family solute:sodium (Na+) symporter
HMPREF1267_RS11855	2	31	-3.303296	hypothetical protein
HMPREF1267_RS11860	3	29	-4.368034	glucosamine-6-phosphate deaminase
HMPREF1267_RS11865	5	25	-2.154100	hypothetical protein
HMPREF1267_RS11870	4	27	-2.721625	ISL3 family transposase
HMPREF1267_RS11875	3	22	-3.309117	hypothetical protein
HMPREF1267_RS11880	3	22	-3.881281	hypothetical protein
HMPREF1267_RS11885	3	22	-3.744772	hypothetical protein
HMPREF1267_RS11890	4	24	-2.362204	phosphoenolpyruvate carboxykinase
HMPREF1267_RS11895	5	30	-5.959038	transcriptional regulator
HMPREF1267_RS12400	2	23	-2.189582	tRNA (guanosine(46)-N7)-methyltransferase TrmB
HMPREF1267_RS12895	0	16	-1.554238	NYN domain-containing protein
HMPREF1267_RS11910	-1	15	-0.001242	hypothetical protein
HMPREF1267_RS12905	0	17	0.402733	lysylphosphatidylglycerol synthetase family
HMPREF1267_RS11930	-1	11	-1.411223	DUF3054 domain-containing protein
HMPREF1267_RS11935	-1	13	-2.227006	hypothetical protein
HMPREF1267_RS11940	1	26	-4.916123	hypothetical protein
HMPREF1267_RS11945	2	36	-7.468748	hypothetical protein
HMPREF1267_RS11950	0	25	-5.804261	IS256 family transposase