charite.christo.libs
Class UncompressInputStream
java.lang.Object
java.io.InputStream
java.io.FilterInputStream
charite.christo.libs.UncompressInputStream
- All Implemented Interfaces:
- java.io.Closeable
public class UncompressInputStream
- extends java.io.FilterInputStream
This class decompresses an input stream containing data compressed with
the unix "compress" utility (LZC, a LZW variant). This code is based
heavily on the unlzw.c code in gzip-1.2.4 (written
by Peter Jannesen) and the original compress code.
Methods inherited from class java.io.FilterInputStream |
close, mark, markSupported, read, reset |
Methods inherited from class java.lang.Object |
equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
UncompressInputStream
public UncompressInputStream(java.io.InputStream is)
throws java.io.IOException
- Parameters:
is
- the input stream to decompress
- Throws:
java.io.IOException
- if the header is malformed
read
public int read()
throws java.io.IOException
- Overrides:
read
in class java.io.FilterInputStream
- Throws:
java.io.IOException
read
public int read(byte[] buf,
int off,
int len)
throws java.io.IOException
- Overrides:
read
in class java.io.FilterInputStream
- Throws:
java.io.IOException
skip
public long skip(long num)
throws java.io.IOException
- Overrides:
skip
in class java.io.FilterInputStream
- Throws:
java.io.IOException
available
public int available()
throws java.io.IOException
- Overrides:
available
in class java.io.FilterInputStream
- Throws:
java.io.IOException
'The most important classes are StrapAlign, Protein and StrapEvent.'