Interactive Structure based

Sequences Alignment Program
  STRAP  

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With this free Java software you can:

  *   Use latest bioinformatics tools with an intuitive
      user interface

  *   Compare proteins by sequence and 3D-similarity

  *   Search protein databases

  *   Underline important sequence positions for example
      phosphorylated or glycosylated residues

  *   Predict secondary structure

  *   Create high quality figures for publications.
      Alignments are fully editable in Word Example.doc

  *   Export to MSF, Clustal, HSSP and Jalview.

  *   Publish protein alignments online


  *   Use STRAP to view results of bioinformatics services
   

More ...
Alignment of alpha subunits of the proteaseome

flavodoxin: 3D-superposition of pdb1flv and pdb1ja1. flavodoxin: Amino acids at Flavin binding pocket are drawn as sticks.

Translation of nucleotides into amino acids.



Author: christoph.gille @ charite .de
Institut für Biochemie, Charité Berlin