'STRAP:multiple sequence alignments '

charite.christo.metannogen
Class CompoundSumFormula

java.lang.Object
  extended by charite.christo.metannogen.CompoundSumFormula

public class CompoundSumFormula
extends Object


Field Summary
static int NO_H
           
 
Constructor Summary
CompoundSumFormula()
           
 
Method Summary
static boolean allCompoundsFound()
           
static int countHydrogen()
           
static String getSumOfCompounds(String[] mm, int[] nn)
           
static String getSumOfCompounds(String[] mm, int[] nn, int options)
           
static void main(String[] argv)
           
static void reset()
           
 
Methods inherited from class java.lang.Object
equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Field Detail

NO_H

public static final int NO_H
See Also:
Constant Field Values
Constructor Detail

CompoundSumFormula

public CompoundSumFormula()
Method Detail

reset

public static void reset()

countHydrogen

public static int countHydrogen()

allCompoundsFound

public static boolean allCompoundsFound()

getSumOfCompounds

public static String getSumOfCompounds(String[] mm,
                                       int[] nn)

getSumOfCompounds

public static String getSumOfCompounds(String[] mm,
                                       int[] nn,
                                       int options)

main

public static void main(String[] argv)
                 throws Exception
Throws:
Exception

'STRAP:multiple sequence alignments '

'The most important classes are StrapAlign, StrapProtein and StrapEvent.'