'STRAP:multiple sequence alignments '

charite.christo.metannogen
Class ReactionCollectionUtils

java.lang.Object
  extended by charite.christo.metannogen.ReactionCollectionUtils

public class ReactionCollectionUtils
extends Object

Implementation independent Utilities


Constructor Summary
ReactionCollectionUtils()
           
 
Method Summary
static
<T extends Reaction>
T[]
groupIdenticalReactions(Reaction[] rr, Class<T> clazz, long options)
           
static int idxOf(Object o, Object[] oo)
           
static
<T extends Reaction>
T[]
unique(Reaction[] rrOrig, Class<T> clazz)
           
 
Methods inherited from class java.lang.Object
equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

ReactionCollectionUtils

public ReactionCollectionUtils()
Method Detail

unique

public static <T extends Reaction> T[] unique(Reaction[] rrOrig,
                                              Class<T> clazz)

groupIdenticalReactions

public static <T extends Reaction> T[] groupIdenticalReactions(Reaction[] rr,
                                                               Class<T> clazz,
                                                               long options)

idxOf

public static int idxOf(Object o,
                        Object[] oo)

'STRAP:multiple sequence alignments '

'The most important classes are StrapAlign, StrapProtein and StrapEvent.'