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'STRAP:multiple sequence alignments '
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charite.christo.strap
Interface ProteinProteinSimilarity

All Superinterfaces:
HasModiCount, HasProtein, ProteinProteinValue, ValueOfProtein
All Known Implementing Classes:
AlignmentScore
public interface ProteinProteinSimilarity
extends ProteinProteinValue

Returns high values for pairs of similar proteins and small values for dissimilar proteins.

Method Summary
 
Methods inherited from interface charite.christo.strap.ProteinProteinValue
compute, getOtherProtein, getValue, setColumnRange, setOtherProtein
 
Methods inherited from interface charite.christo.protein.ValueOfProtein
setProtein
 
Methods inherited from interface charite.christo.protein.HasProtein
getProtein
 
Methods inherited from interface charite.christo.HasModiCount
modificationCount
 

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'STRAP:multiple sequence alignments '
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'The most important classes are StrapAlign, Protein and StrapEvent.'