set_characters_per_line 60
set_color_mode charge
set_conservation_threshold 0
res_num 1 0=1 70=72 91=94 103=105 104=105 181=183 186=187 187=187 188=187 189=187 190=187 191=187 192=187 193=187 194=187 195=187 , subunit_beta_1
res_secstru 0=_ 2=E 8=_ 10=E 16=_ 19=E 22=_ 24=E 28=_ 33=E 38=_ 40=E 47=H 71=_ 73=H 93=_ 94=E 103=_ 106=E 113=_ 119=E 121=_ 123=E 127=H 142=_ 146=H 166=_ 172=E 179=_ 188=H 194=_ , subunit_beta_1
res_insert 0=_ 103=A 104=B 105=_ 186=A 187=B 188=C 189=D 190=E 191=F 192=G 193=H 194=I 195=J , subunit_beta_1
res_chain 0=N , subunit_beta_1
accession_id PDB:1jd2_N , subunit_beta_1
res_num 1 0=6 29=34 139=143 176=179 177=179 178=179 179=179 180=179 182=180 183=180 184=180 185=184 186=184 187=184 188=184 189=186 222=220 242=240 , subunit_alpha_1
res_secstru 0=_ 15=H 26=_ 32=E 37=_ 41=E 47=_ 55=H 60=_ 62=E 65=_ 70=E 75=_ 76=H 100=_ 103=H 122=_ 130=E 138=_ 141=E 148=_ 153=E 156=_ 158=E 162=_ 164=H 181=_ 188=H 206=_ 209=H 212=_ 213=E 220=_ 222=E 226=_ 227=H 240=_ , subunit_alpha_1
res_insert 0=_ 29=A 30=_ 139=A 140=_ 176=A 177=B 178=C 179=D 180=E 181=A 182=B 183=C 184=D 185=_ 186=G 187=H 188=M 189=_ , subunit_alpha_1
res_chain 0=2 , subunit_alpha_1
accession_id PDB:1jd2_2 , subunit_alpha_1
#----------
new_selection subunit_alpha_1/without_icode, myGroup, 179:
add_annotation subunit_alpha_1/without_icode, Color, #667700
add_annotation subunit_alpha_1/without_icode, 3D_view, 3D_spheres
add_annotation subunit_alpha_1/without_icode, Balloon, Here is no insertion code but the position to the left has the same number and icode.
new_selection subunit_alpha_1/with icode, myGroup, 179C:
add_annotation subunit_alpha_1/with icode, Color, #FF0000
add_annotation subunit_alpha_1/with icode, 3D_view, 3D_spheres
new_selection subunit_alpha_1/intervall_bounds_with_icode, myGroup, 143A:-145:
add_annotation subunit_alpha_1/intervall_bounds_with_icode, Color, #00FF00
add_annotation subunit_alpha_1/intervall_bounds_with_icode, 3D_view, 3D_spheres
# Deleted commands: [load , align ]
#end_of_script_1378667377887_
| =====> =====> ==> === >
|
| subunit_beta_1 | TSIMAVTFKDGVILGADSRTTTGAYIA..N |
| subunit_alpha_1 | AGYDRHITIFSPEGRLYQVEYAFKATNQTNINSLAVRGKDCTVVISQKKV.....PDKLL |
| ====> ======>\/\/\/\/\/\/\/\/\/\/\/\/ /\/\/\/\/\/\
|
| RV..TDKLTRVHDKIWCCRSGSAADTQAIADIVQYHLELYTSQYG.TPSTETAASVFKEL |
| DPTTVSYIFCISRTIGMVVNGPIPDARNAALRAKAEAAEFRYKYGYDMPCDVLAKRMANL |
| /\/\/ /\/ ========> ======> => ===>\/\/\/\/\/\/\
|
| CYENK.....DNLTAGIIVAGYDDKNKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDK |
| SQIYTQRAYMRPLGVILTFVSVDEELGPSIYKTDPAGYYVGYKATATGPKQQEITTNLEN |
| /\ \ /\/\/\/\/\/\/ /\/\/ \ ======>
|
| NF....RENM.S..KEETVDFIKHSLS.QAIKW..DGSSGGVIRMVVLTAAGVERL.I.. |
| HFKKSKIDHINEESWEKVVEFAITHMIDALGTEFS....KNDLEVGVATKDKFFTLSAEN |
| \ \/\/ /
|
| FY.PDEY.EQL |
| IEE.RLVAIAEQD |
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