A B C D E F G H I J L M N O P Q R S T U V W X Y Z

D

dbInt - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.PlotRenderer

dbInt - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.StructureRenderer

description - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.FFilter

deviation - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.chemtoolkit.aminoacids.Aminoacid

avergage dihedral angle between two consecutive peptide bond planes (taken twice)

Deviation - Class in pl.krakow.cmuj.bioinformatics.jellipse

Enables plotting the difference between the log,sub>n of radius of curvature of the current structure (observable) and the value of the parameter obtained analyzing model peptides.

Deviation() - Constructor for class pl.krakow.cmuj.bioinformatics.jellipse.Deviation

display(GLDrawable) - Method in class pl.krakow.cmuj.bioinformatics.jellipse.PlotRenderer

Main rederning function.

display(GLDrawable) - Method in class pl.krakow.cmuj.bioinformatics.jellipse.StructureRenderer

Main rederning function.

displayChanged(GLDrawable, boolean, boolean) - Method in class pl.krakow.cmuj.bioinformatics.jellipse.PlotRenderer

Rumour has it that in JoGL 1.0 not implemeted...

displayChanged(GLDrawable, boolean, boolean) - Method in class pl.krakow.cmuj.bioinformatics.jellipse.StructureRenderer

Rumour has it that in JoGL 1.0 not implemeted...

distance(Vector3, Vector3) - Static method in class pl.krakow.cmuj.bioinformatics.jellipse.mathtoolkit.Math3d

calculates the distance between two points (vectors, dim = 3)

DISTANCETOTER - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.PdbFile

DLIST_PEPTIDE - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.StructureRenderer

dontThread - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.Surface

dot(Vector3) - Method in class pl.krakow.cmuj.bioinformatics.jellipse.mathtoolkit.Vector3

performs inner ("dot") multiplication on vectors

drawable - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.jEllipse.NotSoGreedyAnimator

drawable - Variable in class pl.krakow.cmuj.bioinformatics.jellipse.jEllipse.QuiteLazyAnimator

drawText(GLDrawable, String) - Method in class pl.krakow.cmuj.bioinformatics.jellipse.PlotRenderer