[Owl-devel] Uniprot in a relational db

Jose M. Duarte jose.m.duarte at gmail.com
Wed Mar 17 09:37:14 EDT 2010


Not exactly belonging to this list, but I thought it was an easy way to
reach all of you together :-)

I am after having a local copy of the Uniprot Knowledge Base in relational
db format. I remember that Dan had something like this running locally
before.

The data seems to be available here:

http://www.uniprot.org/downloads

in a nice XML format, plus the schema is also available. So really
converting it into a database should be pretty straight forward.

Somebody knows of tools to do this?

Cheers

Jose
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