[Owl-devel] Uniprot in a relational db

[Jose M. Duarte]

Ok adding something to that I just found that they provide the data in RDF
format:

http://dev.isb-sib.ch/projects/uniprot-rdf/
ftp://ftp.uniprot.org/pub/databases/uniprot/current_release/rdf/

Now, I don't know much about RDF but that seems to be almost the solution.
There must be standard tools out there to go from RDF to relational, aren't
there?

Jose



On 17 March 2010 14:37, Jose M. Duarte <jose.m.duarte at gmail.com> wrote:

> Not exactly belonging to this list, but I thought it was an easy way to
> reach all of you together :-)
>
> I am after having a local copy of the Uniprot Knowledge Base in relational
> db format. I remember that Dan had something like this running locally
> before.
>
> The data seems to be available here:
>
> http://www.uniprot.org/downloads
>
> in a nice XML format, plus the schema is also available. So really
> converting it into a database should be pretty straight forward.
>
> Somebody knows of tools to do this?
>
> Cheers
>
> Jose
>
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