Basic Information
Gene ID 100125535
Gene Name rarb
Full Name Uncharacterized protein
Organism Oryzias latipes [8090]

Cross Reference
UniProt H2LUS0 UniGene Ola.18594
PDB NULL OMIM NULL
KEGG ola:100125535 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSORLP00000009848 Gene3D G3DSA:1.10.565.10 IPR008946 149 407 5.50e-90 Nuclear hormone receptor, ligand-binding
ENSORLP00000009848 Gene3D G3DSA:3.30.50.10 IPR013088 74 148 1.40e-33 Zinc finger, NHR/GATA-type
ENSORLP00000009848 Pfam PF00104 IPR000536 215 383 4.80e-30 Nuclear hormone receptor, ligand-binding, core
ENSORLP00000009848 Pfam PF00105 IPR001628 76 144 1.30e-32 Zinc finger, nuclear hormone receptor-type
ENSORLP00000009848 PRINTS PR00047 IPR001628 126 134 3.40e-19 Zinc finger, nuclear hormone receptor-type
ENSORLP00000009848 PRINTS PR00047 IPR001628 134 142 3.40e-19 Zinc finger, nuclear hormone receptor-type
ENSORLP00000009848 PRINTS PR00047 IPR001628 77 93 3.40e-19 Zinc finger, nuclear hormone receptor-type
ENSORLP00000009848 PRINTS PR00047 IPR001628 93 108 3.40e-19 Zinc finger, nuclear hormone receptor-type
ENSORLP00000009848 PRINTS PR00398 IPR001723 138 148 1.80e-34 Steroid hormone receptor
ENSORLP00000009848 PRINTS PR00398 IPR001723 221 242 1.80e-34 Steroid hormone receptor
ENSORLP00000009848 PRINTS PR00398 IPR001723 242 258 1.80e-34 Steroid hormone receptor
ENSORLP00000009848 PRINTS PR00398 IPR001723 309 324 1.80e-34 Steroid hormone receptor
ENSORLP00000009848 PRINTS PR00398 IPR001723 366 383 1.80e-34 Steroid hormone receptor
ENSORLP00000009848 PRINTS PR01292 IPR003078 143 156 1.90e-102 Retinoic acid receptor
ENSORLP00000009848 PRINTS PR01292 IPR003078 166 190 1.90e-102 Retinoic acid receptor
ENSORLP00000009848 PRINTS PR01292 IPR003078 191 207 1.90e-102 Retinoic acid receptor
ENSORLP00000009848 PRINTS PR01292 IPR003078 213 230 1.90e-102 Retinoic acid receptor
ENSORLP00000009848 PRINTS PR01292 IPR003078 264 288 1.90e-102 Retinoic acid receptor
ENSORLP00000009848 PRINTS PR01292 IPR003078 301 313 1.90e-102 Retinoic acid receptor
ENSORLP00000009848 PRINTS PR01292 IPR003078 331 352 1.90e-102 Retinoic acid receptor
ENSORLP00000009848 PRINTS PR01292 IPR003078 375 390 1.90e-102 Retinoic acid receptor
ENSORLP00000009848 PRINTS PR01292 IPR003078 398 411 1.90e-102 Retinoic acid receptor
ENSORLP00000009848 PRINTS PR01292 IPR003078 49 66 1.90e-102 Retinoic acid receptor
ENSORLP00000009848 ProSitePatterns PS00031 IPR001628 77 103 - Zinc finger, nuclear hormone receptor-type
ENSORLP00000009848 ProSiteProfiles PS51030 IPR001628 74 149 0.00e-00 Zinc finger, nuclear hormone receptor-type
ENSORLP00000009848 SMART SM00399 IPR001628 74 145 4.20e-43 Zinc finger, nuclear hormone receptor-type
ENSORLP00000009848 SMART SM00430 IPR000536 220 378 3.80e-35 Nuclear hormone receptor, ligand-binding, core
ENSORLP00000009848 SUPERFAMILY SSF48508 IPR008946 126 405 0.00e-00 Nuclear hormone receptor, ligand-binding

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSORLP00000009848 PF00105 1.3e-32 zf-C4 Zinc finger, C4 type (two domains)
ENSORLP00000009848 PF00104 2.9e-30 Hormone_recep Ligand-binding domain of nuclear hormone receptor

Gene Ontology Annotation
Protein Entry Name Space Description
ENSORLP00000009848 GO:0005634 cellular_component nucleus
ENSORLP00000009848 GO:0003677 molecular_function DNA binding
ENSORLP00000009848 GO:0003707 molecular_function steroid hormone receptor activity
ENSORLP00000009848 GO:0003708 molecular_function retinoic acid receptor activity
ENSORLP00000009848 GO:0008270 molecular_function zinc ion binding
ENSORLP00000009848 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
10029 Cricetulus griseus 100769591 43179 Ictidomys tridecemlineatus 101976820
8083 Xiphophorus maculatus 102236110 9606 Homo sapiens 5916
10116 Rattus norvegicus 685072 28377 Anolis carolinensis ENSACAG00000006832
9646 Ailuropoda melanoleuca ENSAMEG00000012299 7719 Ciona intestinalis ENSCING00000006945
10020 Dipodomys ordii ENSDORG00000016232 69293 Gasterosteus aculeatus ENSGACG00000009372
9595 Gorilla gorilla ENSGGOG00000003215 8049 Gadus morhua ENSGMOG00000017824
9315 Macropus eugenii ENSMEUG00000005385 30611 Otolemur garnettii ENSOGAG00000026655
8128 Oreochromis niloticus ENSONIG00000012223 9978 Ochotona princeps ENSOPRG00000005114
99883 Tetraodon nigroviridis ENSTNIG00000015051 31033 Takifugu rubripes ENSTRUG00000005047
9739 Tursiops truncatus ENSTTRG00000002778

Paralogs
100125516 ENSORLG00000004373 ENSORLG00000008502 ENSORLG00000016394