Basic Information | |||
Gene ID | 100621006 | ||
Gene Name | LOC100621006; REST | ||
Full Name | RE1-silencing transcription factor | ||
Organism | Sus scrofa [9823] |
Cross Reference | |||
UniProt | F1RTW1 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | ssc:100621006 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
ENSEMBL | |||
REFSEQ | |||
REFSEQ | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSSSCP00000021593 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 273 | 304 | 9.30e-10 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSSSCP00000021593 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 305 | 332 | 1.00e-15 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSSSCP00000021593 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 333 | 361 | 1.30e-06 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSSSCP00000021593 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 362 | 393 | 5.80e-05 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSSSCP00000021593 | PANTHER | PTHR10032 | IPR027775 | 1 | 460 | 0.00e-00 | C2H2- zinc finger protein family |
ENSSSCP00000021593 | PANTHER | PTHR10032:SF71 | IPR027757 | 1 | 460 | 0.00e-00 | RE1-silencing transcription factor |
ENSSSCP00000021593 | ProSitePatterns | PS00028 | IPR007087 | 1002 | 1022 | - | Zinc finger, C2H2 |
ENSSSCP00000021593 | ProSiteProfiles | PS50157 | IPR007087 | 1000 | 1022 | 0.00e-00 | Zinc finger, C2H2 |
ENSSSCP00000021593 | ProSiteProfiles | PS50157 | IPR007087 | 158 | 185 | 0.00e-00 | Zinc finger, C2H2 |
ENSSSCP00000021593 | ProSiteProfiles | PS50157 | IPR007087 | 275 | 302 | 0.00e-00 | Zinc finger, C2H2 |
ENSSSCP00000021593 | ProSiteProfiles | PS50157 | IPR007087 | 303 | 330 | 0.00e-00 | Zinc finger, C2H2 |
ENSSSCP00000021593 | ProSiteProfiles | PS50157 | IPR007087 | 331 | 359 | 0.00e-00 | Zinc finger, C2H2 |
ENSSSCP00000021593 | ProSiteProfiles | PS50157 | IPR007087 | 360 | 387 | 0.00e-00 | Zinc finger, C2H2 |
ENSSSCP00000021593 | SMART | SM00355 | IPR015880 | 1000 | 1022 | 2.90e-04 | Zinc finger, C2H2-like |
ENSSSCP00000021593 | SMART | SM00355 | IPR015880 | 158 | 180 | 4.90e-04 | Zinc finger, C2H2-like |
ENSSSCP00000021593 | SMART | SM00355 | IPR015880 | 215 | 237 | 1.00e-02 | Zinc finger, C2H2-like |
ENSSSCP00000021593 | SMART | SM00355 | IPR015880 | 247 | 269 | 9.50e-05 | Zinc finger, C2H2-like |
ENSSSCP00000021593 | SMART | SM00355 | IPR015880 | 275 | 297 | 8.60e-05 | Zinc finger, C2H2-like |
ENSSSCP00000021593 | SMART | SM00355 | IPR015880 | 303 | 325 | 7.00e-07 | Zinc finger, C2H2-like |
ENSSSCP00000021593 | SMART | SM00355 | IPR015880 | 331 | 354 | 8.40e-05 | Zinc finger, C2H2-like |
ENSSSCP00000021593 | SMART | SM00355 | IPR015880 | 360 | 382 | 2.20e-05 | Zinc finger, C2H2-like |
ENSSSCP00000021593 | SMART | SM00355 | IPR015880 | 388 | 411 | 8.50e-05 | Zinc finger, C2H2-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSSSCP00000021593 | PF13465 | 3.5e-30 | zf-H2C2_2 | Zinc-finger double domain |
ENSSSCP00000021593 | PF13909 | 3.1e-17 | zf-H2C2_5 | C2H2-type zinc-finger domain |
ENSSSCP00000021593 | PF00096 | 1.3e-09 | zf-C2H2 | Zinc finger, C2H2 type |
ENSSSCP00000021593 | PF13894 | 1.9e-08 | zf-C2H2_4 | C2H2-type zinc finger |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSSSCP00000021593 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSSSCP00000021593 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSSSCP00000021593 | GO:0005634 | cellular_component | nucleus |
ENSSSCP00000021593 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
ENSSSCP00000021593 | GO:0046872 | molecular_function | metal ion binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9305 | Sarcophilus harrisii | 100921808 | 9597 | Pan paniscus | 100968041 |
9555 | Papio anubis | 101007427 | 39432 | Saimiri boliviensis | 101031593 |
9606 | Homo sapiens | 5978 | 28377 | Anolis carolinensis | ENSACAG00000002355 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000008541 | 9913 | Bos taurus | ENSBTAG00000019359 |
9483 | Callithrix jacchus | ENSCJAG00000004081 | 10020 | Dipodomys ordii | ENSDORG00000010073 |
69293 | Gasterosteus aculeatus | ENSGACG00000016320 | 9031 | Gallus gallus | ENSGALG00000011390 |
8049 | Gadus morhua | ENSGMOG00000004977 | 7897 | Latimeria chalumnae | ENSLACG00000002133 |
9315 | Macropus eugenii | ENSMEUG00000010330 | 30608 | Microcebus murinus | ENSMICG00000017078 |
13616 | Monodelphis domestica | ENSMODG00000020702 | 9669 | Mustela putorius furo | ENSMPUG00000004729 |
9258 | Ornithorhynchus anatinus | ENSOANG00000008887 | 9986 | Oryctolagus cuniculus | ENSOCUG00000001776 |
9978 | Ochotona princeps | ENSOPRG00000008088 | 8090 | Oryzias latipes | ENSORLG00000020493 |
7757 | Petromyzon marinus | ENSPMAG00000002008 | 9601 | Pongo abelii | ENSPPYG00000014745 |
132908 | Pteropus vampyrus | ENSPVAG00000010391 | 10116 | Rattus norvegicus | ENSRNOG00000002074 |
42254 | Sorex araneus | ENSSARG00000010385 | 43179 | Ictidomys tridecemlineatus | ENSSTOG00000007375 |
59729 | Taeniopygia guttata | ENSTGUG00000004749 | 99883 | Tetraodon nigroviridis | ENSTNIG00000006357 |
31033 | Takifugu rubripes | ENSTRUG00000017683 | 9478 | Tarsius syrichta | ENSTSYG00000008676 |
9739 | Tursiops truncatus | ENSTTRG00000010832 | 30538 | Vicugna pacos | ENSVPAG00000000465 |
8364 | Xenopus tropicalis | ENSXETG00000005323 | 8083 | Xiphophorus maculatus | ENSXMAG00000015136 |
10029 | Cricetulus griseus | 100756480 | 13735 | Pelodiscus sinensis | 102445246 |
7955 | Danio rerio | 564772 | 10141 | Cavia porcellus | ENSCPOG00000014066 |
9796 | Equus caballus | ENSECAG00000022536 | 9365 | Erinaceus europaeus | ENSEEUG00000001134 |
9371 | Echinops telfairi | ENSETEG00000011728 | 9685 | Felis catus | ENSFCAG00000003904 |
9595 | Gorilla gorilla | ENSGGOG00000002165 | 9103 | Meleagris gallopavo | ENSMGAG00000008536 |
59463 | Myotis lucifugus | ENSMLUG00000014530 | 9544 | Macaca mulatta | ENSMMUG00000018821 |
30611 | Otolemur garnettii | ENSOGAG00000015986 | 8128 | Oreochromis niloticus | ENSONIG00000001589 |
37347 | Tupaia belangeri | ENSTBEG00000014480 |