Basic Information | |||
Gene ID | 100691048 | ||
Gene Name | pms1 | ||
Full Name | Uncharacterized protein | ||
Organism | Oreochromis niloticus [8128] |
Cross Reference | |||
UniProt | I3JJJ1 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ | |||
REFSEQ | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSONIP00000009035 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 535 | 596 | 1.80e-11 | High mobility group box domain |
ENSONIP00000009035 | Gene3D | G3DSA:3.30.230.10 | IPR014721 | 204 | 337 | 9.80e-27 | Ribosomal protein S5 domain 2-type fold, subgroup |
ENSONIP00000009035 | Gene3D | G3DSA:3.30.565.10 | IPR003594 | 2 | 203 | 2.00e-64 | Histidine kinase-like ATPase, ATP-binding domain |
ENSONIP00000009035 | PANTHER | PTHR10073 | IPR002099 | 1 | 893 | 0.00e-00 | DNA mismatch repair protein family |
ENSONIP00000009035 | Pfam | PF00505 | IPR009071 | 536 | 596 | 2.00e-11 | High mobility group box domain |
ENSONIP00000009035 | Pfam | PF01119 | IPR013507 | 212 | 338 | 5.00e-27 | DNA mismatch repair protein, C-terminal |
ENSONIP00000009035 | ProSitePatterns | PS00058 | IPR014762 | 91 | 97 | - | DNA mismatch repair, conserved site |
ENSONIP00000009035 | ProSiteProfiles | PS50118 | IPR009071 | 533 | 601 | 0.00e-00 | High mobility group box domain |
ENSONIP00000009035 | SMART | SM00387 | IPR003594 | 16 | 151 | 2.10e-02 | Histidine kinase-like ATPase, ATP-binding domain |
ENSONIP00000009035 | SMART | SM00398 | IPR009071 | 532 | 602 | 4.10e-11 | High mobility group box domain |
ENSONIP00000009035 | SUPERFAMILY | SSF47095 | IPR009071 | 529 | 596 | 0.00e-00 | High mobility group box domain |
ENSONIP00000009035 | SUPERFAMILY | SSF54211 | IPR020568 | 191 | 338 | 0.00e-00 | Ribosomal protein S5 domain 2-type fold |
ENSONIP00000009035 | SUPERFAMILY | SSF55874 | IPR003594 | 15 | 199 | 0.00e-00 | Histidine kinase-like ATPase, ATP-binding domain |
ENSONIP00000009035 | TIGRFAM | TIGR00585 | IPR002099 | 1 | 319 | 5.70e-92 | DNA mismatch repair protein family |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSONIP00000009035 | PF01119 | 1.3e-27 | DNA_mis_repair | DNA mismatch repair protein, C-terminal domain |
ENSONIP00000009035 | PF13589 | 5.4e-12 | HATPase_c_3 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase |
ENSONIP00000009035 | PF00505 | 8.7e-12 | HMG_box | HMG (high mobility group) box |
ENSONIP00000009035 | PF02518 | 5.7e-10 | HATPase_c | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase |
ENSONIP00000009035 | PF09011 | 2.8e-09 | HMG_box_2 | HMG-box domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSONIP00000009035 | GO:0006200 | biological_process | ATP catabolic process |
ENSONIP00000009035 | GO:0006298 | biological_process | mismatch repair |
ENSONIP00000009035 | GO:0007131 | biological_process | reciprocal meiotic recombination |
ENSONIP00000009035 | GO:0032300 | cellular_component | mismatch repair complex |
ENSONIP00000009035 | GO:0032389 | cellular_component | MutLalpha complex |
ENSONIP00000009035 | GO:0003697 | molecular_function | single-stranded DNA binding |
ENSONIP00000009035 | GO:0005524 | molecular_function | ATP binding |
ENSONIP00000009035 | GO:0016887 | molecular_function | ATPase activity |
ENSONIP00000009035 | GO:0032407 | molecular_function | MutSalpha complex binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
7425 | Nasonia vitripennis | 100124117 | 7029 | Acyrthosiphon pisum | 100163928 |
9646 | Ailuropoda melanoleuca | 100471680 | 30195 | Bombus terrestris | 100650851 |
10029 | Cricetulus griseus | 100751321 | 59463 | Myotis lucifugus | 102432563 |
13735 | Pelodiscus sinensis | 102449168 | 9103 | Meleagris gallopavo | ENSMGAG00000006180 |
9601 | Pongo abelii | ENSPPYG00000013018 | 132908 | Pteropus vampyrus | ENSPVAG00000000872 |
9739 | Tursiops truncatus | ENSTTRG00000005245 | 132113 | Bombus impatiens | 100749563 |
7463 | Apis florea | 100867362 | 9305 | Sarcophilus harrisii | 100913936 |
9597 | Pan paniscus | 100994682 | 9555 | Papio anubis | 100999364 |
39432 | Saimiri boliviensis | 101035016 | 9669 | Mustela putorius furo | 101674843 |
7897 | Latimeria chalumnae | 102349367 | 9598 | Pan troglodytes | 459827 |
9615 | Canis familiaris | 478840 | 8364 | Xenopus tropicalis | 548373 |
7668 | Strongylocentrotus purpuratus | 592483 | 9358 | Choloepus hoffmanni | ENSCHOG00000012053 |
10141 | Cavia porcellus | ENSCPOG00000002784 | 7955 | Danio rerio | ENSDARG00000000476 |
10020 | Dipodomys ordii | ENSDORG00000000335 | 9371 | Echinops telfairi | ENSETEG00000004643 |
9685 | Felis catus | ENSFCAG00000015491 | 69293 | Gasterosteus aculeatus | ENSGACG00000002634 |
9031 | Gallus gallus | ENSGALG00000002348 | 9595 | Gorilla gorilla | ENSGGOG00000025218 |
9785 | Loxodonta africana | ENSLAFG00000005418 | 9315 | Macropus eugenii | ENSMEUG00000000302 |
9978 | Ochotona princeps | ENSOPRG00000016383 | 8090 | Oryzias latipes | ENSORLG00000015090 |
9813 | Procavia capensis | ENSPCAG00000012223 | 7757 | Petromyzon marinus | ENSPMAG00000002695 |
10116 | Rattus norvegicus | ENSRNOG00000004076 | 42254 | Sorex araneus | ENSSARG00000011866 |
9823 | Sus scrofa | ENSSSCG00000016045 | 43179 | Ictidomys tridecemlineatus | ENSSTOG00000000998 |
37347 | Tupaia belangeri | ENSTBEG00000008266 | 59729 | Taeniopygia guttata | ENSTGUG00000010865 |
99883 | Tetraodon nigroviridis | ENSTNIG00000015715 | 31033 | Takifugu rubripes | ENSTRUG00000012846 |
9478 | Tarsius syrichta | ENSTSYG00000011796 | 30538 | Vicugna pacos | ENSVPAG00000011417 |