Basic Information | |||
Gene ID | ENSLAFG00000005418 | ||
Gene Name | PMS1 | ||
Full Name | Uncharacterized protein | ||
Organism | Loxodonta africana [9785] |
Cross Reference | |||
UniProt | G3SW69 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSLAFP00000004541 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 567 | 632 | 4.70e-16 | High mobility group box domain |
ENSLAFP00000004541 | Gene3D | G3DSA:3.30.230.10 | IPR014721 | 204 | 337 | 9.00e-28 | Ribosomal protein S5 domain 2-type fold, subgroup |
ENSLAFP00000004541 | Gene3D | G3DSA:3.30.565.10 | IPR003594 | 2 | 203 | 1.60e-63 | Histidine kinase-like ATPase, ATP-binding domain |
ENSLAFP00000004541 | PANTHER | PTHR10073 | IPR002099 | 1 | 927 | 0.00e-00 | DNA mismatch repair protein family |
ENSLAFP00000004541 | Pfam | PF00505 | IPR009071 | 567 | 633 | 1.60e-12 | High mobility group box domain |
ENSLAFP00000004541 | Pfam | PF01119 | IPR013507 | 210 | 335 | 8.00e-26 | DNA mismatch repair protein, C-terminal |
ENSLAFP00000004541 | ProSitePatterns | PS00058 | IPR014762 | 91 | 97 | - | DNA mismatch repair, conserved site |
ENSLAFP00000004541 | ProSiteProfiles | PS50118 | IPR009071 | 567 | 635 | 0.00e-00 | High mobility group box domain |
ENSLAFP00000004541 | SMART | SM00387 | IPR003594 | 16 | 151 | 1.50e-02 | Histidine kinase-like ATPase, ATP-binding domain |
ENSLAFP00000004541 | SMART | SM00398 | IPR009071 | 566 | 636 | 1.00e-20 | High mobility group box domain |
ENSLAFP00000004541 | SUPERFAMILY | SSF47095 | IPR009071 | 568 | 639 | 0.00e-00 | High mobility group box domain |
ENSLAFP00000004541 | SUPERFAMILY | SSF54211 | IPR020568 | 191 | 337 | 0.00e-00 | Ribosomal protein S5 domain 2-type fold |
ENSLAFP00000004541 | SUPERFAMILY | SSF55874 | IPR003594 | 16 | 202 | 0.00e-00 | Histidine kinase-like ATPase, ATP-binding domain |
ENSLAFP00000004541 | TIGRFAM | TIGR00585 | IPR002099 | 1 | 318 | 1.80e-97 | DNA mismatch repair protein family |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSLAFP00000004541 | PF01119 | 2.7e-26 | DNA_mis_repair | DNA mismatch repair protein, C-terminal domain |
ENSLAFP00000004541 | PF00505 | 7.3e-13 | HMG_box | HMG (high mobility group) box |
ENSLAFP00000004541 | PF13589 | 1.4e-12 | HATPase_c_3 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase |
ENSLAFP00000004541 | PF02518 | 1.1e-10 | HATPase_c | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase |
ENSLAFP00000004541 | PF09011 | 8.6e-09 | HMG_box_2 | HMG-box domain |
ENSLAFP00000004541 | PF14887 | 8.4e-05 | HMG_box_5 | HMG (high mobility group) box 5 |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSLAFP00000004541 | GO:0006200 | biological_process | ATP catabolic process |
ENSLAFP00000004541 | GO:0006298 | biological_process | mismatch repair |
ENSLAFP00000004541 | GO:0007131 | biological_process | reciprocal meiotic recombination |
ENSLAFP00000004541 | GO:0032300 | cellular_component | mismatch repair complex |
ENSLAFP00000004541 | GO:0032389 | cellular_component | MutLalpha complex |
ENSLAFP00000004541 | GO:0003697 | molecular_function | single-stranded DNA binding |
ENSLAFP00000004541 | GO:0005524 | molecular_function | ATP binding |
ENSLAFP00000004541 | GO:0016887 | molecular_function | ATPase activity |
ENSLAFP00000004541 | GO:0030983 | molecular_function | mismatched DNA binding |
ENSLAFP00000004541 | GO:0032407 | molecular_function | MutSalpha complex binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
30195 | Bombus terrestris | 100650851 | 9305 | Sarcophilus harrisii | 100913936 |
9597 | Pan paniscus | 100994682 | 39432 | Saimiri boliviensis | 101035016 |
8364 | Xenopus tropicalis | 548373 | 7668 | Strongylocentrotus purpuratus | 592483 |
9685 | Felis catus | ENSFCAG00000015491 | 69293 | Gasterosteus aculeatus | ENSGACG00000002634 |
7425 | Nasonia vitripennis | 100124117 | 7029 | Acyrthosiphon pisum | 100163928 |
9646 | Ailuropoda melanoleuca | 100471680 | 8128 | Oreochromis niloticus | 100691048 |
132113 | Bombus impatiens | 100749563 | 10029 | Cricetulus griseus | 100751321 |
7463 | Apis florea | 100867362 | 9555 | Papio anubis | 100999364 |
9669 | Mustela putorius furo | 101674843 | 7897 | Latimeria chalumnae | 102349367 |
59463 | Myotis lucifugus | 102432563 | 13735 | Pelodiscus sinensis | 102449168 |
9598 | Pan troglodytes | 459827 | 9615 | Canis familiaris | 478840 |
9358 | Choloepus hoffmanni | ENSCHOG00000012053 | 10141 | Cavia porcellus | ENSCPOG00000002784 |
7955 | Danio rerio | ENSDARG00000000476 | 10020 | Dipodomys ordii | ENSDORG00000000335 |
9371 | Echinops telfairi | ENSETEG00000004643 | 9031 | Gallus gallus | ENSGALG00000002348 |
9595 | Gorilla gorilla | ENSGGOG00000025218 | 9315 | Macropus eugenii | ENSMEUG00000000302 |
9103 | Meleagris gallopavo | ENSMGAG00000006180 | 9978 | Ochotona princeps | ENSOPRG00000016383 |
8090 | Oryzias latipes | ENSORLG00000015090 | 9813 | Procavia capensis | ENSPCAG00000012223 |
9601 | Pongo abelii | ENSPPYG00000013018 | 132908 | Pteropus vampyrus | ENSPVAG00000000872 |
10116 | Rattus norvegicus | ENSRNOG00000004076 | 42254 | Sorex araneus | ENSSARG00000011866 |
43179 | Ictidomys tridecemlineatus | ENSSTOG00000000998 | 31033 | Takifugu rubripes | ENSTRUG00000012846 |
9739 | Tursiops truncatus | ENSTTRG00000005245 | 30538 | Vicugna pacos | ENSVPAG00000011417 |
9258 | Ornithorhynchus anatinus | ENSOANG00000028363 | 7757 | Petromyzon marinus | ENSPMAG00000002695 |
9823 | Sus scrofa | ENSSSCG00000016045 | 37347 | Tupaia belangeri | ENSTBEG00000008266 |
59729 | Taeniopygia guttata | ENSTGUG00000010865 | 99883 | Tetraodon nigroviridis | ENSTNIG00000015715 |
9478 | Tarsius syrichta | ENSTSYG00000011796 |