Basic Information | |||
Gene ID | 100768698 | ||
Gene Name | LOC100768698 | ||
Full Name | PREDICTED: retinoic acid receptor beta-like isoform 2 [Cricetulusgriseus]. | ||
Organism | Cricetulus griseus [10029] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_003499233 | Gene3D | G3DSA:1.10.565.10 | IPR008946 | 160 | 416 | 2.10e-91 | Nuclear hormone receptor, ligand-binding |
XP_003499233 | Gene3D | G3DSA:3.30.50.10 | IPR013088 | 85 | 159 | 1.80e-33 | Zinc finger, NHR/GATA-type |
XP_003499233 | Pfam | PF00104 | IPR000536 | 225 | 394 | 3.50e-32 | Nuclear hormone receptor, ligand-binding, core |
XP_003499233 | Pfam | PF00105 | IPR001628 | 87 | 155 | 1.60e-32 | Zinc finger, nuclear hormone receptor-type |
XP_003499233 | PRINTS | PR00047 | IPR001628 | 104 | 119 | 5.30e-19 | Zinc finger, nuclear hormone receptor-type |
XP_003499233 | PRINTS | PR00047 | IPR001628 | 137 | 145 | 5.30e-19 | Zinc finger, nuclear hormone receptor-type |
XP_003499233 | PRINTS | PR00047 | IPR001628 | 145 | 153 | 5.30e-19 | Zinc finger, nuclear hormone receptor-type |
XP_003499233 | PRINTS | PR00047 | IPR001628 | 88 | 104 | 5.30e-19 | Zinc finger, nuclear hormone receptor-type |
XP_003499233 | PRINTS | PR00398 | IPR001723 | 149 | 159 | 3.10e-35 | Steroid hormone receptor |
XP_003499233 | PRINTS | PR00398 | IPR001723 | 231 | 252 | 3.10e-35 | Steroid hormone receptor |
XP_003499233 | PRINTS | PR00398 | IPR001723 | 252 | 268 | 3.10e-35 | Steroid hormone receptor |
XP_003499233 | PRINTS | PR00398 | IPR001723 | 319 | 334 | 3.10e-35 | Steroid hormone receptor |
XP_003499233 | PRINTS | PR00398 | IPR001723 | 376 | 393 | 3.10e-35 | Steroid hormone receptor |
XP_003499233 | PRINTS | PR01292 | IPR003078 | 154 | 167 | 1.50e-103 | Retinoic acid receptor |
XP_003499233 | PRINTS | PR01292 | IPR003078 | 176 | 200 | 1.50e-103 | Retinoic acid receptor |
XP_003499233 | PRINTS | PR01292 | IPR003078 | 201 | 217 | 1.50e-103 | Retinoic acid receptor |
XP_003499233 | PRINTS | PR01292 | IPR003078 | 223 | 240 | 1.50e-103 | Retinoic acid receptor |
XP_003499233 | PRINTS | PR01292 | IPR003078 | 274 | 298 | 1.50e-103 | Retinoic acid receptor |
XP_003499233 | PRINTS | PR01292 | IPR003078 | 311 | 323 | 1.50e-103 | Retinoic acid receptor |
XP_003499233 | PRINTS | PR01292 | IPR003078 | 341 | 362 | 1.50e-103 | Retinoic acid receptor |
XP_003499233 | PRINTS | PR01292 | IPR003078 | 385 | 400 | 1.50e-103 | Retinoic acid receptor |
XP_003499233 | PRINTS | PR01292 | IPR003078 | 408 | 421 | 1.50e-103 | Retinoic acid receptor |
XP_003499233 | PRINTS | PR01292 | IPR003078 | 60 | 77 | 1.50e-103 | Retinoic acid receptor |
XP_003499233 | ProSitePatterns | PS00031 | IPR001628 | 88 | 114 | - | Zinc finger, nuclear hormone receptor-type |
XP_003499233 | ProSiteProfiles | PS51030 | IPR001628 | 85 | 160 | 0.00e-00 | Zinc finger, nuclear hormone receptor-type |
XP_003499233 | SMART | SM00399 | IPR001628 | 85 | 156 | 1.20e-42 | Zinc finger, nuclear hormone receptor-type |
XP_003499233 | SMART | SM00430 | IPR000536 | 230 | 388 | 5.70e-37 | Nuclear hormone receptor, ligand-binding, core |
XP_003499233 | SUPERFAMILY | SSF48508 | IPR008946 | 137 | 415 | 0.00e-00 | Nuclear hormone receptor, ligand-binding |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_003499233 | PF00105 | 1.6e-32 | zf-C4 | Zinc finger, C4 type (two domains) |
XP_003499233 | PF00104 | 1.7e-32 | Hormone_recep | Ligand-binding domain of nuclear hormone receptor |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_003499233 | GO:0005634 | cellular_component | nucleus |
XP_003499233 | GO:0003707 | molecular_function | steroid hormone receptor activity |
XP_003499233 | GO:0003708 | molecular_function | retinoic acid receptor activity |
XP_003499233 | GO:0008270 | molecular_function | zinc ion binding |
XP_003499233 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9103 | Meleagris gallopavo | 100545327 | 8128 | Oreochromis niloticus | 100707970 |
9597 | Pan paniscus | 100992361 | 9555 | Papio anubis | 101010670 |
39432 | Saimiri boliviensis | 101053144 | 9685 | Felis catus | 101085742 |
9669 | Mustela putorius furo | 101671927 | 43179 | Ictidomys tridecemlineatus | 101974461 |
7897 | Latimeria chalumnae | 102356597 | 59463 | Myotis lucifugus | 102425322 |
13735 | Pelodiscus sinensis | 102448036 | 10090 | Mus musculus | 218772 |
9031 | Gallus gallus | 396266 | 9606 | Homo sapiens | 5915 |
9598 | Pan troglodytes | 745516 | 59729 | Taeniopygia guttata | 778446 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000000740 | 9913 | Bos taurus | ENSBTAG00000011518 |
9358 | Choloepus hoffmanni | ENSCHOG00000008395 | 7719 | Ciona intestinalis | ENSCING00000006945 |
9483 | Callithrix jacchus | ENSCJAG00000003911 | 10141 | Cavia porcellus | ENSCPOG00000015410 |
51511 | Ciona savignyi | ENSCSAVG00000006794 | 9361 | Dasypus novemcinctus | ENSDNOG00000010433 |
9796 | Equus caballus | ENSECAG00000016976 | 9365 | Erinaceus europaeus | ENSEEUG00000006140 |
9595 | Gorilla gorilla | ENSGGOG00000002331 | 9785 | Loxodonta africana | ENSLAFG00000015824 |
30608 | Microcebus murinus | ENSMICG00000013447 | 9544 | Macaca mulatta | ENSMMUG00000007367 |
13616 | Monodelphis domestica | ENSMODG00000014926 | 61853 | Nomascus leucogenys | ENSNLEG00000001793 |
9258 | Ornithorhynchus anatinus | ENSOANG00000012236 | 9986 | Oryctolagus cuniculus | ENSOCUG00000000714 |
30611 | Otolemur garnettii | ENSOGAG00000024257 | 8090 | Oryzias latipes | ENSORLG00000008502 |
7757 | Petromyzon marinus | ENSPMAG00000000088 | 9601 | Pongo abelii | ENSPPYG00000014062 |
132908 | Pteropus vampyrus | ENSPVAG00000012533 | 42254 | Sorex araneus | ENSSARG00000003129 |
9305 | Sarcophilus harrisii | ENSSHAG00000009801 | 9823 | Sus scrofa | ENSSSCG00000011212 |
30538 | Vicugna pacos | ENSVPAG00000009206 | 8364 | Xenopus tropicalis | ENSXETG00000007272 |
8083 | Xiphophorus maculatus | ENSXMAG00000017035 | 10116 | Rattus norvegicus | 24706 |
7668 | Strongylocentrotus purpuratus | 574567 | 9478 | Tarsius syrichta | ENSTSYG00000008658 |
Paralogs | |||
100769591 |