Basic Information | |||
Gene ID | 101053144 | ||
Gene Name | RARB | ||
Full Name | PREDICTED: retinoic acid receptor beta [Saimiri boliviensisboliviensis]. | ||
Organism | Saimiri boliviensis [39432] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_003936090 | Gene3D | G3DSA:1.10.565.10 | IPR008946 | 153 | 409 | 1.30e-91 | Nuclear hormone receptor, ligand-binding |
XP_003936090 | Gene3D | G3DSA:3.30.50.10 | IPR013088 | 78 | 152 | 2.60e-33 | Zinc finger, NHR/GATA-type |
XP_003936090 | Pfam | PF00104 | IPR000536 | 218 | 387 | 7.30e-33 | Nuclear hormone receptor, ligand-binding, core |
XP_003936090 | Pfam | PF00105 | IPR001628 | 80 | 148 | 1.60e-32 | Zinc finger, nuclear hormone receptor-type |
XP_003936090 | PRINTS | PR00047 | IPR001628 | 130 | 138 | 5.00e-19 | Zinc finger, nuclear hormone receptor-type |
XP_003936090 | PRINTS | PR00047 | IPR001628 | 138 | 146 | 5.00e-19 | Zinc finger, nuclear hormone receptor-type |
XP_003936090 | PRINTS | PR00047 | IPR001628 | 81 | 97 | 5.00e-19 | Zinc finger, nuclear hormone receptor-type |
XP_003936090 | PRINTS | PR00047 | IPR001628 | 97 | 112 | 5.00e-19 | Zinc finger, nuclear hormone receptor-type |
XP_003936090 | PRINTS | PR00398 | IPR001723 | 142 | 152 | 1.10e-35 | Steroid hormone receptor |
XP_003936090 | PRINTS | PR00398 | IPR001723 | 224 | 245 | 1.10e-35 | Steroid hormone receptor |
XP_003936090 | PRINTS | PR00398 | IPR001723 | 245 | 261 | 1.10e-35 | Steroid hormone receptor |
XP_003936090 | PRINTS | PR00398 | IPR001723 | 312 | 327 | 1.10e-35 | Steroid hormone receptor |
XP_003936090 | PRINTS | PR00398 | IPR001723 | 369 | 386 | 1.10e-35 | Steroid hormone receptor |
XP_003936090 | PRINTS | PR01292 | IPR003078 | 147 | 160 | 1.10e-103 | Retinoic acid receptor |
XP_003936090 | PRINTS | PR01292 | IPR003078 | 169 | 193 | 1.10e-103 | Retinoic acid receptor |
XP_003936090 | PRINTS | PR01292 | IPR003078 | 194 | 210 | 1.10e-103 | Retinoic acid receptor |
XP_003936090 | PRINTS | PR01292 | IPR003078 | 216 | 233 | 1.10e-103 | Retinoic acid receptor |
XP_003936090 | PRINTS | PR01292 | IPR003078 | 267 | 291 | 1.10e-103 | Retinoic acid receptor |
XP_003936090 | PRINTS | PR01292 | IPR003078 | 304 | 316 | 1.10e-103 | Retinoic acid receptor |
XP_003936090 | PRINTS | PR01292 | IPR003078 | 334 | 355 | 1.10e-103 | Retinoic acid receptor |
XP_003936090 | PRINTS | PR01292 | IPR003078 | 378 | 393 | 1.10e-103 | Retinoic acid receptor |
XP_003936090 | PRINTS | PR01292 | IPR003078 | 401 | 414 | 1.10e-103 | Retinoic acid receptor |
XP_003936090 | PRINTS | PR01292 | IPR003078 | 53 | 70 | 1.10e-103 | Retinoic acid receptor |
XP_003936090 | ProSitePatterns | PS00031 | IPR001628 | 81 | 107 | - | Zinc finger, nuclear hormone receptor-type |
XP_003936090 | ProSiteProfiles | PS51030 | IPR001628 | 78 | 153 | 0.00e-00 | Zinc finger, nuclear hormone receptor-type |
XP_003936090 | SMART | SM00399 | IPR001628 | 78 | 149 | 1.20e-42 | Zinc finger, nuclear hormone receptor-type |
XP_003936090 | SMART | SM00430 | IPR000536 | 223 | 381 | 2.70e-38 | Nuclear hormone receptor, ligand-binding, core |
XP_003936090 | SUPERFAMILY | SSF48508 | IPR008946 | 130 | 408 | 0.00e-00 | Nuclear hormone receptor, ligand-binding |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_003936090 | PF00104 | 3.3e-33 | Hormone_recep | Ligand-binding domain of nuclear hormone receptor |
XP_003936090 | PF00105 | 1.6e-32 | zf-C4 | Zinc finger, C4 type (two domains) |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_003936090 | GO:0005634 | cellular_component | nucleus |
XP_003936090 | GO:0003707 | molecular_function | steroid hormone receptor activity |
XP_003936090 | GO:0003708 | molecular_function | retinoic acid receptor activity |
XP_003936090 | GO:0008270 | molecular_function | zinc ion binding |
XP_003936090 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
10029 | Cricetulus griseus | 100768698 | 9103 | Meleagris gallopavo | 100545327 |
9597 | Pan paniscus | 100992361 | 9555 | Papio anubis | 101010670 |
31033 | Takifugu rubripes | 101073854 | 9685 | Felis catus | 101085742 |
13735 | Pelodiscus sinensis | 102448036 | 9031 | Gallus gallus | 396266 |
9598 | Pan troglodytes | 745516 | 9358 | Choloepus hoffmanni | ENSCHOG00000008395 |
7719 | Ciona intestinalis | ENSCING00000006945 | 10141 | Cavia porcellus | ENSCPOG00000015410 |
51511 | Ciona savignyi | ENSCSAVG00000006794 | 10020 | Dipodomys ordii | ENSDORG00000007008 |
9371 | Echinops telfairi | ENSETEG00000001997 | 9595 | Gorilla gorilla | ENSGGOG00000002331 |
8049 | Gadus morhua | ENSGMOG00000017824 | 9785 | Loxodonta africana | ENSLAFG00000015824 |
30608 | Microcebus murinus | ENSMICG00000013447 | 9544 | Macaca mulatta | ENSMMUG00000007367 |
13616 | Monodelphis domestica | ENSMODG00000014926 | 9986 | Oryctolagus cuniculus | ENSOCUG00000000714 |
9978 | Ochotona princeps | ENSOPRG00000012948 | 7757 | Petromyzon marinus | ENSPMAG00000000088 |
9601 | Pongo abelii | ENSPPYG00000014062 | 132908 | Pteropus vampyrus | ENSPVAG00000012533 |
9305 | Sarcophilus harrisii | ENSSHAG00000009801 | 9823 | Sus scrofa | ENSSSCG00000011212 |
37347 | Tupaia belangeri | ENSTBEG00000014225 | 8083 | Xiphophorus maculatus | ENSXMAG00000017035 |
9669 | Mustela putorius furo | 101671927 | 59463 | Myotis lucifugus | 102425322 |
10090 | Mus musculus | 218772 | 10116 | Rattus norvegicus | 24706 |
7668 | Strongylocentrotus purpuratus | 574567 | 9606 | Homo sapiens | 5915 |
59729 | Taeniopygia guttata | 778446 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000000740 |
9913 | Bos taurus | ENSBTAG00000011518 | 9483 | Callithrix jacchus | ENSCJAG00000003911 |
9361 | Dasypus novemcinctus | ENSDNOG00000010433 | 9796 | Equus caballus | ENSECAG00000016976 |
9365 | Erinaceus europaeus | ENSEEUG00000006140 | 69293 | Gasterosteus aculeatus | ENSGACG00000009372 |
9258 | Ornithorhynchus anatinus | ENSOANG00000012236 | 8128 | Oreochromis niloticus | ENSONIG00000012223 |
8090 | Oryzias latipes | ENSORLG00000008502 | 42254 | Sorex araneus | ENSSARG00000003129 |
99883 | Tetraodon nigroviridis | ENSTNIG00000015051 | 9478 | Tarsius syrichta | ENSTSYG00000008658 |
30538 | Vicugna pacos | ENSVPAG00000009206 | 8364 | Xenopus tropicalis | ENSXETG00000007272 |
Paralogs | |||
101036514 | 101028779 |