Basic Information | |||
Gene ID | 101016885 | ||
Gene Name | LMX1B | ||
Full Name | PREDICTED: LIM homeobox transcription factor 1-beta [Papio anubis]. | ||
Organism | Papio anubis [9555] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_003911988 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 251 | 291 | 3.30e-12 | Homeodomain-like |
XP_003911988 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 119 | 171 | 4.40e-15 | Zinc finger, LIM-type |
XP_003911988 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 55 | 118 | 5.20e-17 | Zinc finger, LIM-type |
XP_003911988 | Pfam | PF00046 | IPR001356 | 251 | 280 | 8.20e-10 | Homeobox domain |
XP_003911988 | Pfam | PF00412 | IPR001781 | 115 | 172 | 1.20e-15 | Zinc finger, LIM-type |
XP_003911988 | Pfam | PF00412 | IPR001781 | 56 | 111 | 1.40e-16 | Zinc finger, LIM-type |
XP_003911988 | ProSitePatterns | PS00027 | IPR017970 | 256 | 279 | - | Homeobox, conserved site |
XP_003911988 | ProSitePatterns | PS00478 | IPR001781 | 115 | 150 | - | Zinc finger, LIM-type |
XP_003911988 | ProSitePatterns | PS00478 | IPR001781 | 56 | 90 | - | Zinc finger, LIM-type |
XP_003911988 | ProSiteProfiles | PS50023 | IPR001781 | 114 | 175 | 0.00e-00 | Zinc finger, LIM-type |
XP_003911988 | ProSiteProfiles | PS50023 | IPR001781 | 54 | 113 | 0.00e-00 | Zinc finger, LIM-type |
XP_003911988 | ProSiteProfiles | PS50071 | IPR001356 | 217 | 281 | 0.00e-00 | Homeobox domain |
XP_003911988 | SMART | SM00132 | IPR001781 | 114 | 168 | 2.10e-19 | Zinc finger, LIM-type |
XP_003911988 | SMART | SM00132 | IPR001781 | 55 | 106 | 1.80e-19 | Zinc finger, LIM-type |
XP_003911988 | SMART | SM00389 | IPR001356 | 219 | 285 | 8.60e-08 | Homeobox domain |
XP_003911988 | SUPERFAMILY | SSF46689 | IPR009057 | 206 | 280 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_003911988 | PF00412 | 1.3e-32 | LIM | LIM domain |
XP_003911988 | PF00046 | 5.1e-10 | Homeobox | Homeobox domain |
XP_003911988 | PF05920 | 0.00039 | Homeobox_KN | Homeobox KN domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_003911988 | GO:0006351 | biological_process | transcription, DNA-templated |
XP_003911988 | GO:0007275 | biological_process | multicellular organismal development |
XP_003911988 | GO:0005634 | cellular_component | nucleus |
XP_003911988 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
XP_003911988 | GO:0008270 | molecular_function | zinc ion binding |
XP_003911988 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9597 | Pan paniscus | 100984491 | 13616 | Monodelphis domestica | 100016205 |
8128 | Oreochromis niloticus | 100696266 | 9685 | Felis catus | 101086098 |
8090 | Oryzias latipes | 101159592 | 9365 | Erinaceus europaeus | ENSEEUG00000007978 |
9031 | Gallus gallus | ENSGALG00000000936 | 8049 | Gadus morhua | ENSGMOG00000006452 |
7897 | Latimeria chalumnae | ENSLACG00000016220 | 9785 | Loxodonta africana | ENSLAFG00000015481 |
30608 | Microcebus murinus | ENSMICG00000010287 | 9544 | Macaca mulatta | ENSMMUG00000002236 |
61853 | Nomascus leucogenys | ENSNLEG00000017412 | 30611 | Otolemur garnettii | ENSOGAG00000001158 |
9598 | Pan troglodytes | ENSPTRG00000021377 | 132908 | Pteropus vampyrus | ENSPVAG00000004265 |
9823 | Sus scrofa | ENSSSCG00000005606 | 9739 | Tursiops truncatus | ENSTTRG00000013199 |
8364 | Xenopus tropicalis | ENSXETG00000000742 | 39432 | Saimiri boliviensis | 101047214 |
9669 | Mustela putorius furo | 101686194 | 7955 | Danio rerio | 554360 |
9913 | Bos taurus | ENSBTAG00000010228 | 9615 | Canis familiaris | ENSCAFG00000030076 |
9483 | Callithrix jacchus | ENSCJAG00000007071 | 10141 | Cavia porcellus | ENSCPOG00000023429 |
10020 | Dipodomys ordii | ENSDORG00000002371 | 9796 | Equus caballus | ENSECAG00000018605 |
9371 | Echinops telfairi | ENSETEG00000019757 | 69293 | Gasterosteus aculeatus | ENSGACG00000012015 |
9315 | Macropus eugenii | ENSMEUG00000012451 | 9103 | Meleagris gallopavo | ENSMGAG00000008601 |
9978 | Ochotona princeps | ENSOPRG00000015599 | 9813 | Procavia capensis | ENSPCAG00000013608 |
13735 | Pelodiscus sinensis | ENSPSIG00000005200 | 10116 | Rattus norvegicus | ENSRNOG00000017019 |
43179 | Ictidomys tridecemlineatus | ENSSTOG00000026973 | 59729 | Taeniopygia guttata | ENSTGUG00000007409 |
99883 | Tetraodon nigroviridis | ENSTNIG00000018979 | 31033 | Takifugu rubripes | ENSTRUG00000009042 |
8083 | Xiphophorus maculatus | ENSXMAG00000000206 |