Basic Information | |||
Gene ID | ENSPTRG00000021377 | ||
Gene Name | LMX1B | ||
Full Name | Uncharacterized protein | ||
Organism | Pan troglodytes [9598] |
Cross Reference | |||
UniProt | H2QXW6 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSPTRP00000036533 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 157 | 224 | 4.10e-24 | Homeodomain-like |
ENSPTRP00000036533 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 74 | 124 | 3.60e-15 | Zinc finger, LIM-type |
ENSPTRP00000036533 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 8 | 73 | 1.40e-17 | Zinc finger, LIM-type |
ENSPTRP00000036533 | Pfam | PF00046 | IPR001356 | 173 | 229 | 1.40e-17 | Homeobox domain |
ENSPTRP00000036533 | Pfam | PF00412 | IPR001781 | 68 | 125 | 1.00e-15 | Zinc finger, LIM-type |
ENSPTRP00000036533 | Pfam | PF00412 | IPR001781 | 9 | 64 | 1.20e-16 | Zinc finger, LIM-type |
ENSPTRP00000036533 | ProSitePatterns | PS00027 | IPR017970 | 205 | 228 | - | Homeobox, conserved site |
ENSPTRP00000036533 | ProSitePatterns | PS00478 | IPR001781 | 68 | 103 | - | Zinc finger, LIM-type |
ENSPTRP00000036533 | ProSitePatterns | PS00478 | IPR001781 | 9 | 43 | - | Zinc finger, LIM-type |
ENSPTRP00000036533 | ProSiteProfiles | PS50023 | IPR001781 | 67 | 128 | 0.00e-00 | Zinc finger, LIM-type |
ENSPTRP00000036533 | ProSiteProfiles | PS50023 | IPR001781 | 7 | 66 | 0.00e-00 | Zinc finger, LIM-type |
ENSPTRP00000036533 | ProSiteProfiles | PS50071 | IPR001356 | 170 | 230 | 0.00e-00 | Homeobox domain |
ENSPTRP00000036533 | SMART | SM00132 | IPR001781 | 67 | 121 | 2.10e-19 | Zinc finger, LIM-type |
ENSPTRP00000036533 | SMART | SM00132 | IPR001781 | 8 | 59 | 1.80e-19 | Zinc finger, LIM-type |
ENSPTRP00000036533 | SMART | SM00389 | IPR001356 | 172 | 234 | 6.00e-24 | Homeobox domain |
ENSPTRP00000036533 | SUPERFAMILY | SSF46689 | IPR009057 | 161 | 230 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSPTRP00000036533 | PF00412 | 9.6e-33 | LIM | LIM domain |
ENSPTRP00000036533 | PF00046 | 6.6e-18 | Homeobox | Homeobox domain |
ENSPTRP00000036533 | PF05920 | 0.00012 | Homeobox_KN | Homeobox KN domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSPTRP00000036533 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSPTRP00000036533 | GO:0007275 | biological_process | multicellular organismal development |
ENSPTRP00000036533 | GO:0005634 | cellular_component | nucleus |
ENSPTRP00000036533 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
ENSPTRP00000036533 | GO:0008270 | molecular_function | zinc ion binding |
ENSPTRP00000036533 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
13616 | Monodelphis domestica | 100016205 | 7425 | Nasonia vitripennis | 100121564 |
10224 | Saccoglossus kowalevskii | 100328994 | 30195 | Bombus terrestris | 100644798 |
8128 | Oreochromis niloticus | 100696266 | 132113 | Bombus impatiens | 100744167 |
7463 | Apis florea | 100872112 | 143995 | Megachile rotundata | 100879464 |
34638 | Metaseiulus occidentalis | 100909136 | 9597 | Pan paniscus | 100984491 |
9555 | Papio anubis | 101016885 | 39432 | Saimiri boliviensis | 101047214 |
9685 | Felis catus | 101086098 | 8090 | Oryzias latipes | 101159592 |
9669 | Mustela putorius furo | 101686194 | 7955 | Danio rerio | 554360 |
7668 | Strongylocentrotus purpuratus | 585635 | 7070 | Tribolium castaneum | 655586 |
7460 | Apis mellifera | 724778 | 9913 | Bos taurus | ENSBTAG00000010228 |
9615 | Canis familiaris | ENSCAFG00000030076 | 7719 | Ciona intestinalis | ENSCING00000013048 |
9483 | Callithrix jacchus | ENSCJAG00000007071 | 10141 | Cavia porcellus | ENSCPOG00000023429 |
51511 | Ciona savignyi | ENSCSAVG00000000947 | 10020 | Dipodomys ordii | ENSDORG00000002371 |
9796 | Equus caballus | ENSECAG00000018605 | 9365 | Erinaceus europaeus | ENSEEUG00000007978 |
9371 | Echinops telfairi | ENSETEG00000019757 | 69293 | Gasterosteus aculeatus | ENSGACG00000012015 |
9031 | Gallus gallus | ENSGALG00000000936 | 8049 | Gadus morhua | ENSGMOG00000006452 |
7897 | Latimeria chalumnae | ENSLACG00000016220 | 9785 | Loxodonta africana | ENSLAFG00000015481 |
9315 | Macropus eugenii | ENSMEUG00000012451 | 9103 | Meleagris gallopavo | ENSMGAG00000008601 |
30608 | Microcebus murinus | ENSMICG00000010287 | 9544 | Macaca mulatta | ENSMMUG00000002236 |
30611 | Otolemur garnettii | ENSOGAG00000001158 | 9978 | Ochotona princeps | ENSOPRG00000015599 |
9813 | Procavia capensis | ENSPCAG00000013608 | 13735 | Pelodiscus sinensis | ENSPSIG00000005200 |
61853 | Nomascus leucogenys | ENSNLEG00000017412 | 132908 | Pteropus vampyrus | ENSPVAG00000004265 |
10116 | Rattus norvegicus | ENSRNOG00000017019 | 9823 | Sus scrofa | ENSSSCG00000005606 |
43179 | Ictidomys tridecemlineatus | ENSSTOG00000026973 | 59729 | Taeniopygia guttata | ENSTGUG00000007409 |
99883 | Tetraodon nigroviridis | ENSTNIG00000018979 | 31033 | Takifugu rubripes | ENSTRUG00000009042 |
9739 | Tursiops truncatus | ENSTTRG00000013199 | 8364 | Xenopus tropicalis | ENSXETG00000000742 |
8083 | Xiphophorus maculatus | ENSXMAG00000000206 |