Basic Information | |||
Gene ID | 101968464 | ||
Gene Name | TFAM | ||
Full Name | Uncharacterized protein | ||
Organism | Ictidomys tridecemlineatus [43179] |
Cross Reference | |||
UniProt | I3LYX7 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSSTOP00000001454 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 152 | 238 | 2.90e-19 | High mobility group box domain |
ENSSTOP00000001454 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 49 | 139 | 2.00e-20 | High mobility group box domain |
ENSSTOP00000001454 | Pfam | PF00505 | IPR009071 | 50 | 115 | 1.90e-20 | High mobility group box domain |
ENSSTOP00000001454 | Pfam | PF09011 | IPR009071 | 154 | 218 | 8.20e-13 | High mobility group box domain |
ENSSTOP00000001454 | ProSiteProfiles | PS50118 | IPR009071 | 155 | 219 | 0.00e-00 | High mobility group box domain |
ENSSTOP00000001454 | ProSiteProfiles | PS50118 | IPR009071 | 50 | 118 | 0.00e-00 | High mobility group box domain |
ENSSTOP00000001454 | SMART | SM00398 | IPR009071 | 154 | 220 | 2.10e-14 | High mobility group box domain |
ENSSTOP00000001454 | SMART | SM00398 | IPR009071 | 49 | 119 | 2.80e-22 | High mobility group box domain |
ENSSTOP00000001454 | SUPERFAMILY | SSF47095 | IPR009071 | 144 | 232 | 0.00e-00 | High mobility group box domain |
ENSSTOP00000001454 | SUPERFAMILY | SSF47095 | IPR009071 | 47 | 137 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSSTOP00000001454 | PF00505 | 1.9e-31 | HMG_box | HMG (high mobility group) box |
ENSSTOP00000001454 | PF09011 | 6.7e-23 | HMG_box_2 | HMG-box domain |
ENSSTOP00000001454 | PF04690 | 3.6e-05 | YABBY | YABBY protein |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSSTOP00000001454 | GO:0006390 | biological_process | transcription from mitochondrial promoter |
ENSSTOP00000001454 | GO:0006391 | biological_process | transcription initiation from mitochondrial promoter |
ENSSTOP00000001454 | GO:0045893 | biological_process | positive regulation of transcription, DNA-templated |
ENSSTOP00000001454 | GO:0042645 | cellular_component | mitochondrial nucleoid |
ENSSTOP00000001454 | GO:0003682 | molecular_function | chromatin binding |
ENSSTOP00000001454 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
ENSSTOP00000001454 | GO:0008301 | molecular_function | DNA binding, bending |
ENSSTOP00000001454 | GO:0070363 | molecular_function | mitochondrial light strand promoter sense binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9555 | Papio anubis | 101015737 | 39432 | Saimiri boliviensis | 101051183 |
9685 | Felis catus | 101096672 | 9595 | Gorilla gorilla | 101124511 |
7668 | Strongylocentrotus purpuratus | 100888309 | 9305 | Sarcophilus harrisii | 100932137 |
9597 | Pan paniscus | 100974915 | 9669 | Mustela putorius furo | 101672042 |
10090 | Mus musculus | 21780 | 10116 | Rattus norvegicus | 83474 |
9913 | Bos taurus | ENSBTAG00000003546 | 9483 | Callithrix jacchus | ENSCJAG00000010625 |
10020 | Dipodomys ordii | ENSDORG00000014013 | 69293 | Gasterosteus aculeatus | ENSGACG00000015427 |
30608 | Microcebus murinus | ENSMICG00000004619 | 9813 | Procavia capensis | ENSPCAG00000015006 |
132908 | Pteropus vampyrus | ENSPVAG00000007395 | 42254 | Sorex araneus | ENSSARG00000009849 |
9823 | Sus scrofa | ENSSSCG00000029824 | 37347 | Tupaia belangeri | ENSTBEG00000013122 |
59729 | Taeniopygia guttata | ENSTGUG00000005161 | 9478 | Tarsius syrichta | ENSTSYG00000011290 |
9739 | Tursiops truncatus | ENSTTRG00000009246 | 8083 | Xiphophorus maculatus | 102231887 |
59463 | Myotis lucifugus | 102423213 | 7227 | Drosophila melanogaster | 42433 |
9615 | Canis familiaris | 488989 | 9544 | Macaca mulatta | 701368 |
28377 | Anolis carolinensis | ENSACAG00000004364 | 9358 | Choloepus hoffmanni | ENSCHOG00000000562 |
10141 | Cavia porcellus | ENSCPOG00000000134 | 7955 | Danio rerio | ENSDARG00000063145 |
9361 | Dasypus novemcinctus | ENSDNOG00000000535 | 9796 | Equus caballus | ENSECAG00000009622 |
9031 | Gallus gallus | ENSGALG00000002703 | 8049 | Gadus morhua | ENSGMOG00000015839 |
7897 | Latimeria chalumnae | ENSLACG00000006287 | 9785 | Loxodonta africana | ENSLAFG00000012891 |
9315 | Macropus eugenii | ENSMEUG00000008802 | 13616 | Monodelphis domestica | ENSMODG00000016127 |
61853 | Nomascus leucogenys | ENSNLEG00000012295 | 9258 | Ornithorhynchus anatinus | ENSOANG00000004613 |
9986 | Oryctolagus cuniculus | ENSOCUG00000014405 | 30611 | Otolemur garnettii | ENSOGAG00000014943 |
9978 | Ochotona princeps | ENSOPRG00000002565 | 7757 | Petromyzon marinus | ENSPMAG00000006487 |
13735 | Pelodiscus sinensis | ENSPSIG00000013980 | 9598 | Pan troglodytes | ENSPTRG00000002519 |
99883 | Tetraodon nigroviridis | ENSTNIG00000003786 | 31033 | Takifugu rubripes | ENSTRUG00000003953 |
30538 | Vicugna pacos | ENSVPAG00000006945 | 8364 | Xenopus tropicalis | ENSXETG00000005116 |