Basic Information | |||
Gene ID | 83474 ; Check Expression Profles ; Check TFs & Targets Binding | ||
Gene Name | Tfam | ||
Full Name | Transcription factor A, mitochondrial | ||
Organism | Rattus norvegicus [10116] |
Cross Reference | |||
UniProt | Q91ZW1 | UniGene | Rn.18266 |
PDB | NULL | OMIM | NULL |
KEGG | rno:83474 | UCSC | RGD:620682 |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSRNOP00000000753 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 151 | 230 | 8.40e-19 | High mobility group box domain |
ENSRNOP00000000753 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 47 | 138 | 5.00e-21 | High mobility group box domain |
ENSRNOP00000000753 | Pfam | PF00505 | IPR009071 | 49 | 117 | 4.50e-21 | High mobility group box domain |
ENSRNOP00000000753 | Pfam | PF09011 | IPR009071 | 153 | 217 | 1.10e-13 | High mobility group box domain |
ENSRNOP00000000753 | ProSiteProfiles | PS50118 | IPR009071 | 154 | 218 | 0.00e-00 | High mobility group box domain |
ENSRNOP00000000753 | ProSiteProfiles | PS50118 | IPR009071 | 49 | 117 | 0.00e-00 | High mobility group box domain |
ENSRNOP00000000753 | SMART | SM00398 | IPR009071 | 153 | 219 | 2.60e-13 | High mobility group box domain |
ENSRNOP00000000753 | SMART | SM00398 | IPR009071 | 48 | 118 | 8.20e-25 | High mobility group box domain |
ENSRNOP00000000753 | SUPERFAMILY | SSF47095 | IPR009071 | 144 | 229 | 0.00e-00 | High mobility group box domain |
ENSRNOP00000000753 | SUPERFAMILY | SSF47095 | IPR009071 | 41 | 125 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSRNOP00000000753 | PF00505 | 2.6e-29 | HMG_box | HMG (high mobility group) box |
ENSRNOP00000000753 | PF09011 | 2.1e-21 | HMG_box_2 | HMG-box domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSRNOP00000000753 | GO:0006390 | biological_process | transcription from mitochondrial promoter |
ENSRNOP00000000753 | GO:0006391 | biological_process | transcription initiation from mitochondrial promoter |
ENSRNOP00000000753 | GO:0045893 | biological_process | positive regulation of transcription, DNA-templated |
ENSRNOP00000000753 | GO:0042645 | cellular_component | mitochondrial nucleoid |
ENSRNOP00000000753 | GO:0003682 | molecular_function | chromatin binding |
ENSRNOP00000000753 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
ENSRNOP00000000753 | GO:0008301 | molecular_function | DNA binding, bending |
ENSRNOP00000000753 | GO:0070363 | molecular_function | mitochondrial light strand promoter sense binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9305 | Sarcophilus harrisii | 100932137 | 9555 | Papio anubis | 101015737 |
39432 | Saimiri boliviensis | 101051183 | 9685 | Felis catus | 101096672 |
9595 | Gorilla gorilla | 101124511 | 9669 | Mustela putorius furo | 101672042 |
43179 | Ictidomys tridecemlineatus | 101968464 | 8083 | Xiphophorus maculatus | 102231887 |
59463 | Myotis lucifugus | 102423213 | 9615 | Canis familiaris | 488989 |
7070 | Tribolium castaneum | 662946 | 9544 | Macaca mulatta | 701368 |
7668 | Strongylocentrotus purpuratus | 100888309 | 9597 | Pan paniscus | 100974915 |
10090 | Mus musculus | 21780 | 9913 | Bos taurus | ENSBTAG00000003546 |
9483 | Callithrix jacchus | ENSCJAG00000010625 | 10020 | Dipodomys ordii | ENSDORG00000014013 |
69293 | Gasterosteus aculeatus | ENSGACG00000015427 | 9813 | Procavia capensis | ENSPCAG00000015006 |
132908 | Pteropus vampyrus | ENSPVAG00000007395 | 9823 | Sus scrofa | ENSSSCG00000029824 |
59729 | Taeniopygia guttata | ENSTGUG00000005161 | 9478 | Tarsius syrichta | ENSTSYG00000011290 |
9739 | Tursiops truncatus | ENSTTRG00000009246 | 28377 | Anolis carolinensis | ENSACAG00000004364 |
9358 | Choloepus hoffmanni | ENSCHOG00000000562 | 10141 | Cavia porcellus | ENSCPOG00000000134 |
7955 | Danio rerio | ENSDARG00000063145 | 9361 | Dasypus novemcinctus | ENSDNOG00000000535 |
9796 | Equus caballus | ENSECAG00000009622 | 9031 | Gallus gallus | ENSGALG00000002703 |
8049 | Gadus morhua | ENSGMOG00000015839 | 7897 | Latimeria chalumnae | ENSLACG00000006287 |
9785 | Loxodonta africana | ENSLAFG00000012891 | 9315 | Macropus eugenii | ENSMEUG00000008802 |
30608 | Microcebus murinus | ENSMICG00000004619 | 13616 | Monodelphis domestica | ENSMODG00000016127 |
61853 | Nomascus leucogenys | ENSNLEG00000012295 | 9258 | Ornithorhynchus anatinus | ENSOANG00000004613 |
9986 | Oryctolagus cuniculus | ENSOCUG00000014405 | 30611 | Otolemur garnettii | ENSOGAG00000014943 |
9978 | Ochotona princeps | ENSOPRG00000002565 | 7757 | Petromyzon marinus | ENSPMAG00000006487 |
13735 | Pelodiscus sinensis | ENSPSIG00000013980 | 9598 | Pan troglodytes | ENSPTRG00000002519 |
42254 | Sorex araneus | ENSSARG00000009849 | 37347 | Tupaia belangeri | ENSTBEG00000013122 |
99883 | Tetraodon nigroviridis | ENSTNIG00000003786 | 31033 | Takifugu rubripes | ENSTRUG00000003953 |
30538 | Vicugna pacos | ENSVPAG00000006945 | 8364 | Xenopus tropicalis | ENSXETG00000005116 |