Basic Information
Gene ID 19401 ; Check Expression Profles ; Check TFs & Targets Binding
Gene Name Rara; Nr1b1
Full Name Retinoic acid receptor alpha
Organism Mus musculus [10090]

Cross Reference
UniProt P11416 UniGene Mm.439744
PDB NULL OMIM NULL
KEGG mmu:19401 UCSC uc007lhz.2

Protein Interactions
DIP DIP-31480N
IntAct P11416
MINT MINT-5210296
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
ENSEMBL
ENSEMBL
ENSEMBL
ENSEMBL
REFSEQ
REFSEQ
REFSEQ
REFSEQ
REFSEQ
REFSEQ
REFSEQ
REFSEQ
REFSEQ
REFSEQ
REFSEQ
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSMUSP00000129791 Gene3D G3DSA:1.10.565.10 IPR008946 160 416 9.40e-95 Nuclear hormone receptor, ligand-binding
ENSMUSP00000129791 Gene3D G3DSA:3.30.50.10 IPR013088 86 159 1.70e-33 Zinc finger, NHR/GATA-type
ENSMUSP00000129791 Pfam PF00104 IPR000536 220 394 1.10e-30 Nuclear hormone receptor, ligand-binding, core
ENSMUSP00000129791 Pfam PF00105 IPR001628 87 155 1.60e-32 Zinc finger, nuclear hormone receptor-type
ENSMUSP00000129791 PRINTS PR00047 IPR001628 104 119 9.00e-19 Zinc finger, nuclear hormone receptor-type
ENSMUSP00000129791 PRINTS PR00047 IPR001628 137 145 9.00e-19 Zinc finger, nuclear hormone receptor-type
ENSMUSP00000129791 PRINTS PR00047 IPR001628 145 153 9.00e-19 Zinc finger, nuclear hormone receptor-type
ENSMUSP00000129791 PRINTS PR00047 IPR001628 88 104 9.00e-19 Zinc finger, nuclear hormone receptor-type
ENSMUSP00000129791 PRINTS PR00398 IPR001723 149 159 4.90e-34 Steroid hormone receptor
ENSMUSP00000129791 PRINTS PR00398 IPR001723 231 252 4.90e-34 Steroid hormone receptor
ENSMUSP00000129791 PRINTS PR00398 IPR001723 252 268 4.90e-34 Steroid hormone receptor
ENSMUSP00000129791 PRINTS PR00398 IPR001723 319 334 4.90e-34 Steroid hormone receptor
ENSMUSP00000129791 PRINTS PR00398 IPR001723 376 393 4.90e-34 Steroid hormone receptor
ENSMUSP00000129791 PRINTS PR01292 IPR003078 154 167 4.40e-104 Retinoic acid receptor
ENSMUSP00000129791 PRINTS PR01292 IPR003078 176 200 4.40e-104 Retinoic acid receptor
ENSMUSP00000129791 PRINTS PR01292 IPR003078 201 217 4.40e-104 Retinoic acid receptor
ENSMUSP00000129791 PRINTS PR01292 IPR003078 223 240 4.40e-104 Retinoic acid receptor
ENSMUSP00000129791 PRINTS PR01292 IPR003078 274 298 4.40e-104 Retinoic acid receptor
ENSMUSP00000129791 PRINTS PR01292 IPR003078 311 323 4.40e-104 Retinoic acid receptor
ENSMUSP00000129791 PRINTS PR01292 IPR003078 341 362 4.40e-104 Retinoic acid receptor
ENSMUSP00000129791 PRINTS PR01292 IPR003078 385 400 4.40e-104 Retinoic acid receptor
ENSMUSP00000129791 PRINTS PR01292 IPR003078 408 421 4.40e-104 Retinoic acid receptor
ENSMUSP00000129791 PRINTS PR01292 IPR003078 60 77 4.40e-104 Retinoic acid receptor
ENSMUSP00000129791 ProSitePatterns PS00031 IPR001628 88 114 - Zinc finger, nuclear hormone receptor-type
ENSMUSP00000129791 ProSiteProfiles PS51030 IPR001628 85 160 0.00e-00 Zinc finger, nuclear hormone receptor-type
ENSMUSP00000129791 SMART SM00399 IPR001628 85 156 2.40e-42 Zinc finger, nuclear hormone receptor-type
ENSMUSP00000129791 SMART SM00430 IPR000536 230 388 4.00e-37 Nuclear hormone receptor, ligand-binding, core
ENSMUSP00000129791 SUPERFAMILY SSF48508 IPR008946 137 164 0.00e-00 Nuclear hormone receptor, ligand-binding
ENSMUSP00000129791 SUPERFAMILY SSF48508 IPR008946 196 415 0.00e-00 Nuclear hormone receptor, ligand-binding

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSMUSP00000129791 PF00105 1.6e-32 zf-C4 Zinc finger, C4 type (two domains)
ENSMUSP00000129791 PF00104 7.4e-31 Hormone_recep Ligand-binding domain of nuclear hormone receptor

Gene Ontology Annotation
Protein Entry Name Space Description
ENSMUSP00000129791 GO:0048384 biological_process retinoic acid receptor signaling pathway
ENSMUSP00000129791 GO:0005634 cellular_component nucleus
ENSMUSP00000129791 GO:0003677 molecular_function DNA binding
ENSMUSP00000129791 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity
ENSMUSP00000129791 GO:0003707 molecular_function steroid hormone receptor activity
ENSMUSP00000129791 GO:0003708 molecular_function retinoic acid receptor activity
ENSMUSP00000129791 GO:0008270 molecular_function zinc ion binding
ENSMUSP00000129791 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
9597 Pan paniscus 100967548 39432 Saimiri boliviensis 101036514
43179 Ictidomys tridecemlineatus 101974461 9986 Oryctolagus cuniculus 100009009
9555 Papio anubis 101019389 9685 Felis catus 101083048
9669 Mustela putorius furo 101682641 10116 Rattus norvegicus 24705
10020 Dipodomys ordii ENSDORG00000015185 9796 Equus caballus ENSECAG00000023358
13616 Monodelphis domestica ENSMODG00000013112 61853 Nomascus leucogenys ENSNLEG00000001793
9598 Pan troglodytes ENSPTRG00000009120 9305 Sarcophilus harrisii ENSSHAG00000012505
99883 Tetraodon nigroviridis ENSTNIG00000012850 10141 Cavia porcellus ENSCPOG00000007730
9371 Echinops telfairi ENSETEG00000013732 30611 Otolemur garnettii ENSOGAG00000024257
9601 Pongo abelii ENSPPYG00000008462 31033 Takifugu rubripes ENSTRUG00000016415

Paralogs
19411 218772