Basic Information | |||
Gene ID | 101036514 | ||
Gene Name | RARA | ||
Full Name | PREDICTED: retinoic acid receptor alpha [Saimiri boliviensisboliviensis]. | ||
Organism | Saimiri boliviensis [39432] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_003942870 | Gene3D | G3DSA:1.10.565.10 | IPR008946 | 155 | 411 | 1.80e-94 | Nuclear hormone receptor, ligand-binding |
XP_003942870 | Gene3D | G3DSA:3.30.50.10 | IPR013088 | 81 | 154 | 1.10e-33 | Zinc finger, NHR/GATA-type |
XP_003942870 | Pfam | PF00104 | IPR000536 | 215 | 389 | 2.00e-30 | Nuclear hormone receptor, ligand-binding, core |
XP_003942870 | Pfam | PF00105 | IPR001628 | 82 | 150 | 1.20e-32 | Zinc finger, nuclear hormone receptor-type |
XP_003942870 | PRINTS | PR00047 | IPR001628 | 132 | 140 | 5.40e-19 | Zinc finger, nuclear hormone receptor-type |
XP_003942870 | PRINTS | PR00047 | IPR001628 | 140 | 148 | 5.40e-19 | Zinc finger, nuclear hormone receptor-type |
XP_003942870 | PRINTS | PR00047 | IPR001628 | 83 | 99 | 5.40e-19 | Zinc finger, nuclear hormone receptor-type |
XP_003942870 | PRINTS | PR00047 | IPR001628 | 99 | 114 | 5.40e-19 | Zinc finger, nuclear hormone receptor-type |
XP_003942870 | PRINTS | PR00398 | IPR001723 | 144 | 154 | 2.30e-34 | Steroid hormone receptor |
XP_003942870 | PRINTS | PR00398 | IPR001723 | 226 | 247 | 2.30e-34 | Steroid hormone receptor |
XP_003942870 | PRINTS | PR00398 | IPR001723 | 247 | 263 | 2.30e-34 | Steroid hormone receptor |
XP_003942870 | PRINTS | PR00398 | IPR001723 | 314 | 329 | 2.30e-34 | Steroid hormone receptor |
XP_003942870 | PRINTS | PR00398 | IPR001723 | 371 | 388 | 2.30e-34 | Steroid hormone receptor |
XP_003942870 | PRINTS | PR01292 | IPR003078 | 149 | 162 | 8.10e-104 | Retinoic acid receptor |
XP_003942870 | PRINTS | PR01292 | IPR003078 | 171 | 195 | 8.10e-104 | Retinoic acid receptor |
XP_003942870 | PRINTS | PR01292 | IPR003078 | 196 | 212 | 8.10e-104 | Retinoic acid receptor |
XP_003942870 | PRINTS | PR01292 | IPR003078 | 218 | 235 | 8.10e-104 | Retinoic acid receptor |
XP_003942870 | PRINTS | PR01292 | IPR003078 | 269 | 293 | 8.10e-104 | Retinoic acid receptor |
XP_003942870 | PRINTS | PR01292 | IPR003078 | 306 | 318 | 8.10e-104 | Retinoic acid receptor |
XP_003942870 | PRINTS | PR01292 | IPR003078 | 336 | 357 | 8.10e-104 | Retinoic acid receptor |
XP_003942870 | PRINTS | PR01292 | IPR003078 | 380 | 395 | 8.10e-104 | Retinoic acid receptor |
XP_003942870 | PRINTS | PR01292 | IPR003078 | 403 | 416 | 8.10e-104 | Retinoic acid receptor |
XP_003942870 | PRINTS | PR01292 | IPR003078 | 55 | 72 | 8.10e-104 | Retinoic acid receptor |
XP_003942870 | ProSitePatterns | PS00031 | IPR001628 | 83 | 109 | - | Zinc finger, nuclear hormone receptor-type |
XP_003942870 | ProSiteProfiles | PS51030 | IPR001628 | 80 | 155 | 0.00e-00 | Zinc finger, nuclear hormone receptor-type |
XP_003942870 | SMART | SM00399 | IPR001628 | 80 | 151 | 1.40e-42 | Zinc finger, nuclear hormone receptor-type |
XP_003942870 | SMART | SM00430 | IPR000536 | 225 | 383 | 8.20e-37 | Nuclear hormone receptor, ligand-binding, core |
XP_003942870 | SUPERFAMILY | SSF48508 | IPR008946 | 132 | 410 | 0.00e-00 | Nuclear hormone receptor, ligand-binding |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_003942870 | PF00105 | 1.2e-32 | zf-C4 | Zinc finger, C4 type (two domains) |
XP_003942870 | PF00104 | 1.3e-30 | Hormone_recep | Ligand-binding domain of nuclear hormone receptor |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_003942870 | GO:0005634 | cellular_component | nucleus |
XP_003942870 | GO:0003707 | molecular_function | steroid hormone receptor activity |
XP_003942870 | GO:0003708 | molecular_function | retinoic acid receptor activity |
XP_003942870 | GO:0008270 | molecular_function | zinc ion binding |
XP_003942870 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9986 | Oryctolagus cuniculus | 100009009 | 9597 | Pan paniscus | 100967548 |
9555 | Papio anubis | 101019389 | 9685 | Felis catus | 101083048 |
9669 | Mustela putorius furo | 101682641 | 43179 | Ictidomys tridecemlineatus | 101974461 |
7897 | Latimeria chalumnae | 102356597 | 10090 | Mus musculus | 19401 |
10116 | Rattus norvegicus | 24705 | 9606 | Homo sapiens | 5914 |
10141 | Cavia porcellus | ENSCPOG00000007730 | 10020 | Dipodomys ordii | ENSDORG00000015185 |
9796 | Equus caballus | ENSECAG00000023358 | 9371 | Echinops telfairi | ENSETEG00000013732 |
9595 | Gorilla gorilla | ENSGGOG00000003114 | 9544 | Macaca mulatta | ENSMMUG00000012486 |
13616 | Monodelphis domestica | ENSMODG00000013112 | 61853 | Nomascus leucogenys | ENSNLEG00000001793 |
30611 | Otolemur garnettii | ENSOGAG00000024257 | 9813 | Procavia capensis | ENSPCAG00000001576 |
9601 | Pongo abelii | ENSPPYG00000008462 | 9598 | Pan troglodytes | ENSPTRG00000009120 |
132908 | Pteropus vampyrus | ENSPVAG00000008572 | 99883 | Tetraodon nigroviridis | ENSTNIG00000012850 |
31033 | Takifugu rubripes | ENSTRUG00000016415 | 9739 | Tursiops truncatus | ENSTTRG00000016901 |
8364 | Xenopus tropicalis | ENSXETG00000024390 | 8083 | Xiphophorus maculatus | ENSXMAG00000014632 |
69293 | Gasterosteus aculeatus | ENSGACG00000005297 |
Paralogs | |||
101028779 | 101053144 |