Basic Information | |||
Gene ID | 30486 | ||
Gene Name | rxrbb; nr2b2b, rxrd | ||
Full Name | Retinoic acid receptor RXR-beta-B | ||
Organism | Danio rerio [7955] |
Cross Reference | |||
UniProt | Q90417 | UniGene | Dr.350 |
PDB | NULL | OMIM | NULL |
KEGG | dre:30486 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
ENSEMBL | |||
REFSEQ | |||
REFSEQ | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSDARP00000104696 | Gene3D | G3DSA:1.10.565.10 | IPR008946 | 179 | 421 | 2.00e-96 | Nuclear hormone receptor, ligand-binding |
ENSDARP00000104696 | Gene3D | G3DSA:3.30.50.10 | IPR013088 | 85 | 169 | 1.50e-33 | Zinc finger, NHR/GATA-type |
ENSDARP00000104696 | Pfam | PF00104 | IPR000536 | 213 | 405 | 1.90e-38 | Nuclear hormone receptor, ligand-binding, core |
ENSDARP00000104696 | Pfam | PF00105 | IPR001628 | 89 | 157 | 1.70e-31 | Zinc finger, nuclear hormone receptor-type |
ENSDARP00000104696 | Pfam | PF11825 | IPR021780 | 5 | 77 | 1.50e-19 | Nuclear/hormone receptor activator site AF-1 |
ENSDARP00000104696 | PRINTS | PR00047 | IPR001628 | 106 | 121 | 5.00e-19 | Zinc finger, nuclear hormone receptor-type |
ENSDARP00000104696 | PRINTS | PR00047 | IPR001628 | 139 | 147 | 5.00e-19 | Zinc finger, nuclear hormone receptor-type |
ENSDARP00000104696 | PRINTS | PR00047 | IPR001628 | 147 | 155 | 5.00e-19 | Zinc finger, nuclear hormone receptor-type |
ENSDARP00000104696 | PRINTS | PR00047 | IPR001628 | 90 | 106 | 5.00e-19 | Zinc finger, nuclear hormone receptor-type |
ENSDARP00000104696 | PRINTS | PR00398 | IPR001723 | 151 | 161 | 1.10e-35 | Steroid hormone receptor |
ENSDARP00000104696 | PRINTS | PR00398 | IPR001723 | 220 | 241 | 1.10e-35 | Steroid hormone receptor |
ENSDARP00000104696 | PRINTS | PR00398 | IPR001723 | 241 | 257 | 1.10e-35 | Steroid hormone receptor |
ENSDARP00000104696 | PRINTS | PR00398 | IPR001723 | 323 | 338 | 1.10e-35 | Steroid hormone receptor |
ENSDARP00000104696 | PRINTS | PR00398 | IPR001723 | 380 | 397 | 1.10e-35 | Steroid hormone receptor |
ENSDARP00000104696 | PRINTS | PR00545 | IPR000003 | 158 | 171 | 5.60e-36 | Retinoid X receptor/HNF4 |
ENSDARP00000104696 | PRINTS | PR00545 | IPR000003 | 271 | 296 | 5.60e-36 | Retinoid X receptor/HNF4 |
ENSDARP00000104696 | PRINTS | PR00545 | IPR000003 | 311 | 329 | 5.60e-36 | Retinoid X receptor/HNF4 |
ENSDARP00000104696 | PRINTS | PR00545 | IPR000003 | 352 | 371 | 5.60e-36 | Retinoid X receptor/HNF4 |
ENSDARP00000104696 | ProSitePatterns | PS00031 | IPR001628 | 90 | 116 | - | Zinc finger, nuclear hormone receptor-type |
ENSDARP00000104696 | ProSiteProfiles | PS51030 | IPR001628 | 87 | 162 | 0.00e-00 | Zinc finger, nuclear hormone receptor-type |
ENSDARP00000104696 | SMART | SM00399 | IPR001628 | 87 | 158 | 4.30e-41 | Zinc finger, nuclear hormone receptor-type |
ENSDARP00000104696 | SMART | SM00430 | IPR000536 | 219 | 392 | 7.90e-52 | Nuclear hormone receptor, ligand-binding, core |
ENSDARP00000104696 | SUPERFAMILY | SSF48508 | IPR008946 | 140 | 419 | 0.00e-00 | Nuclear hormone receptor, ligand-binding |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSDARP00000104696 | PF00104 | 1.3e-38 | Hormone_recep | Ligand-binding domain of nuclear hormone receptor |
ENSDARP00000104696 | PF00105 | 6.3e-32 | zf-C4 | Zinc finger, C4 type (two domains) |
ENSDARP00000104696 | PF11825 | 8.8e-20 | Nuc_recep-AF1 | Nuclear/hormone receptor activator site AF-1 |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
8364 | Xenopus tropicalis | 548691 | 69293 | Gasterosteus aculeatus | ENSGACG00000000096 |
8128 | Oreochromis niloticus | ENSONIG00000020007 | 8090 | Oryzias latipes | ENSORLG00000006476 |
99883 | Tetraodon nigroviridis | ENSTNIG00000018446 | 8083 | Xiphophorus maculatus | ENSXMAG00000014275 |
7897 | Latimeria chalumnae | ENSLACG00000006999 | 31033 | Takifugu rubripes | ENSTRUG00000008509 |
Paralogs | |||
ENSDARG00000035127 |