Basic Information
Gene ID 548691
Gene Name rxrb; TGas080l23.1-001
Full Name Retinoic acid receptor RXR-beta (Retinoid X receptor beta)
Organism Xenopus tropicalis [8364]

Cross Reference
UniProt Q28CI3 UniGene Str.60
PDB NULL OMIM NULL
KEGG xtr:548691 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING 8364.ENSXETP00000044057

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSXETP00000044055 Gene3D G3DSA:1.10.565.10 IPR008946 221 446 1.40e-102 Nuclear hormone receptor, ligand-binding
ENSXETP00000044055 Gene3D G3DSA:3.30.50.10 IPR013088 125 206 4.30e-33 Zinc finger, NHR/GATA-type
ENSXETP00000044055 Pfam PF00104 IPR000536 252 429 6.00e-39 Nuclear hormone receptor, ligand-binding, core
ENSXETP00000044055 Pfam PF00105 IPR001628 127 195 9.00e-32 Zinc finger, nuclear hormone receptor-type
ENSXETP00000044055 Pfam PF11825 IPR021780 13 120 1.00e-24 Nuclear/hormone receptor activator site AF-1
ENSXETP00000044055 PRINTS PR00047 IPR001628 128 144 9.20e-19 Zinc finger, nuclear hormone receptor-type
ENSXETP00000044055 PRINTS PR00047 IPR001628 144 159 9.20e-19 Zinc finger, nuclear hormone receptor-type
ENSXETP00000044055 PRINTS PR00047 IPR001628 177 185 9.20e-19 Zinc finger, nuclear hormone receptor-type
ENSXETP00000044055 PRINTS PR00047 IPR001628 185 193 9.20e-19 Zinc finger, nuclear hormone receptor-type
ENSXETP00000044055 PRINTS PR00398 IPR001723 189 199 3.10e-35 Steroid hormone receptor
ENSXETP00000044055 PRINTS PR00398 IPR001723 258 279 3.10e-35 Steroid hormone receptor
ENSXETP00000044055 PRINTS PR00398 IPR001723 279 295 3.10e-35 Steroid hormone receptor
ENSXETP00000044055 PRINTS PR00398 IPR001723 347 362 3.10e-35 Steroid hormone receptor
ENSXETP00000044055 PRINTS PR00398 IPR001723 404 421 3.10e-35 Steroid hormone receptor
ENSXETP00000044055 PRINTS PR00545 IPR000003 196 209 5.90e-42 Retinoid X receptor/HNF4
ENSXETP00000044055 PRINTS PR00545 IPR000003 309 334 5.90e-42 Retinoid X receptor/HNF4
ENSXETP00000044055 PRINTS PR00545 IPR000003 335 353 5.90e-42 Retinoid X receptor/HNF4
ENSXETP00000044055 PRINTS PR00545 IPR000003 376 395 5.90e-42 Retinoid X receptor/HNF4
ENSXETP00000044055 ProSitePatterns PS00031 IPR001628 128 154 - Zinc finger, nuclear hormone receptor-type
ENSXETP00000044055 ProSiteProfiles PS51030 IPR001628 125 200 0.00e-00 Zinc finger, nuclear hormone receptor-type
ENSXETP00000044055 SMART SM00399 IPR001628 125 196 8.20e-42 Zinc finger, nuclear hormone receptor-type
ENSXETP00000044055 SMART SM00430 IPR000536 257 416 2.10e-53 Nuclear hormone receptor, ligand-binding, core
ENSXETP00000044055 SUPERFAMILY SSF48508 IPR008946 178 443 0.00e-00 Nuclear hormone receptor, ligand-binding

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSXETP00000044055 PF00104 4.1e-39 Hormone_recep Ligand-binding domain of nuclear hormone receptor
ENSXETP00000044055 PF00105 5.1e-32 zf-C4 Zinc finger, C4 type (two domains)
ENSXETP00000044055 PF11825 6.1e-25 Nuc_recep-AF1 Nuclear/hormone receptor activator site AF-1

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
9823 Sus scrofa 100156801 9986 Oryctolagus cuniculus 100354287
34638 Metaseiulus occidentalis 100897482 39432 Saimiri boliviensis 101040304
7955 Danio rerio 30486 99883 Tetraodon nigroviridis ENSTNIG00000018176
9646 Ailuropoda melanoleuca ENSAMEG00000001719 9358 Choloepus hoffmanni ENSCHOG00000009975
51511 Ciona savignyi ENSCSAVG00000007831 9361 Dasypus novemcinctus ENSDNOG00000015431
9365 Erinaceus europaeus ENSEEUG00000012064 69293 Gasterosteus aculeatus ENSGACG00000000096
7897 Latimeria chalumnae ENSLACG00000006999 9785 Loxodonta africana ENSLAFG00000002141
61853 Nomascus leucogenys ENSNLEG00000006809 8128 Oreochromis niloticus ENSONIG00000020007
9978 Ochotona princeps ENSOPRG00000000905 8090 Oryzias latipes ENSORLG00000006476
132908 Pteropus vampyrus ENSPVAG00000001888 10116 Rattus norvegicus ENSRNOG00000000464
37347 Tupaia belangeri ENSTBEG00000015312 31033 Takifugu rubripes ENSTRUG00000008509
9739 Tursiops truncatus ENSTTRG00000004291 8083 Xiphophorus maculatus ENSXMAG00000014275

Paralogs
779621 ENSXETG00000012733