Basic Information | |||
Gene ID | 5991 ; Check Expression Profles ; Check TFs & Targets Binding | ||
Gene Name | RFX3 | ||
Full Name | Transcription factor RFX3 | ||
Organism | Homo sapiens [9606] |
Cross Reference | |||
UniProt | P48380 | UniGene | Hs.734648 |
PDB | NULL | OMIM | 601337 |
KEGG | hsa:5991 | UCSC | uc003zht.1 |
Protein Interactions | |
DIP | NULL |
IntAct | P48380 |
MINT | NULL |
STRING | 9606.ENSP00000371434 |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
ENSEMBL | |||
ENSEMBL | |||
REFSEQ | |||
REFSEQ | |||
REFSEQ | |||
REFSEQ | |||
REFSEQ | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSP00000371434 | Gene3D | G3DSA:1.10.10.10 | IPR011991 | 183 | 258 | 6.90e-42 | Winged helix-turn-helix DNA-binding domain |
ENSP00000371434 | Pfam | PF02257 | IPR003150 | 176 | 259 | 2.00e-38 | DNA-binding RFX-type winged-helix domain |
ENSP00000371434 | Pfam | PF04589 | IPR007668 | 1 | 139 | 7.00e-55 | RFX1 transcription activation region |
ENSP00000371434 | ProSiteProfiles | PS51526 | IPR003150 | 183 | 258 | 0.00e-00 | DNA-binding RFX-type winged-helix domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSP00000371434 | PF04589 | 0 | RFX1_trans_act | RFX1 transcription activation region |
ENSP00000371434 | PF02257 | 4.6e-39 | RFX_DNA_binding | RFX DNA-binding domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSP00000371434 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSP00000371434 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSP00000371434 | GO:0005634 | cellular_component | nucleus |
ENSP00000371434 | GO:0003677 | molecular_function | DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9986 | Oryctolagus cuniculus | 100009410 | 7425 | Nasonia vitripennis | 100121130 |
6087 | Hydra magnipapillata | 100203968 | 10224 | Saccoglossus kowalevskii | 100372282 |
9646 | Ailuropoda melanoleuca | 100472256 | 9823 | Sus scrofa | 100511439 |
30195 | Bombus terrestris | 100642228 | 9785 | Loxodonta africana | 100653791 |
8128 | Oreochromis niloticus | 100708111 | 132113 | Bombus impatiens | 100749382 |
10029 | Cricetulus griseus | 100767562 | 7463 | Apis florea | 100864431 |
143995 | Megachile rotundata | 100876007 | 34638 | Metaseiulus occidentalis | 100908403 |
9597 | Pan paniscus | 100974143 | 9555 | Papio anubis | 101014246 |
39432 | Saimiri boliviensis | 101052699 | 9685 | Felis catus | 101089969 |
9669 | Mustela putorius furo | 101676154 | 8083 | Xiphophorus maculatus | 102228455 |
10090 | Mus musculus | 19726 | 10116 | Rattus norvegicus | 288906 |
7227 | Drosophila melanogaster | 41266 | 7668 | Strongylocentrotus purpuratus | 586051 |
59463 | Myotis lucifugus | ENSMLUG00000013765 | 13616 | Monodelphis domestica | ENSMODG00000015410 |
30611 | Otolemur garnettii | ENSOGAG00000007762 | 132908 | Pteropus vampyrus | ENSPVAG00000001088 |
7070 | Tribolium castaneum | 664071 | 28377 | Anolis carolinensis | ENSACAG00000015671 |
9913 | Bos taurus | ENSBTAG00000000819 | 9615 | Canis familiaris | ENSCAFG00000002053 |
9358 | Choloepus hoffmanni | ENSCHOG00000008113 | 7719 | Ciona intestinalis | ENSCING00000009186 |
10141 | Cavia porcellus | ENSCPOG00000000900 | 51511 | Ciona savignyi | ENSCSAVG00000006455 |
7955 | Danio rerio | ENSDARG00000014550 | 9361 | Dasypus novemcinctus | ENSDNOG00000018668 |
10020 | Dipodomys ordii | ENSDORG00000013906 | 9796 | Equus caballus | ENSECAG00000011075 |
9365 | Erinaceus europaeus | ENSEEUG00000013595 | 9371 | Echinops telfairi | ENSETEG00000003677 |
69293 | Gasterosteus aculeatus | ENSGACG00000016864 | 9595 | Gorilla gorilla | ENSGGOG00000003805 |
8049 | Gadus morhua | ENSGMOG00000013997 | 7897 | Latimeria chalumnae | ENSLACG00000011846 |
9315 | Macropus eugenii | ENSMEUG00000011061 | 9103 | Meleagris gallopavo | ENSMGAG00000005240 |
9544 | Macaca mulatta | ENSMMUG00000000802 | 9258 | Ornithorhynchus anatinus | ENSOANG00000014996 |
9978 | Ochotona princeps | ENSOPRG00000000862 | 8090 | Oryzias latipes | ENSORLG00000007747 |
9813 | Procavia capensis | ENSPCAG00000015591 | 7757 | Petromyzon marinus | ENSPMAG00000002263 |
9601 | Pongo abelii | ENSPPYG00000019253 | 13735 | Pelodiscus sinensis | ENSPSIG00000005608 |
42254 | Sorex araneus | ENSSARG00000013845 | 9305 | Sarcophilus harrisii | ENSSHAG00000003775 |
43179 | Ictidomys tridecemlineatus | ENSSTOG00000006974 | 37347 | Tupaia belangeri | ENSTBEG00000016009 |
99883 | Tetraodon nigroviridis | ENSTNIG00000009051 | 31033 | Takifugu rubripes | ENSTRUG00000013889 |
9478 | Tarsius syrichta | ENSTSYG00000006974 | 9739 | Tursiops truncatus | ENSTTRG00000003709 |
30538 | Vicugna pacos | ENSVPAG00000005472 | 8364 | Xenopus tropicalis | ENSXETG00000011698 |