Basic Information | |||
Gene ID | ENSCING00000009186 | ||
Gene Name | rfx1/2/3 | ||
Full Name | Uncharacterized protein | ||
Organism | Ciona intestinalis [7719] |
Cross Reference | |||
UniProt | F6YLZ5 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSCINP00000018687 | Gene3D | G3DSA:1.10.10.10 | IPR011991 | 244 | 318 | 3.10e-37 | Winged helix-turn-helix DNA-binding domain |
ENSCINP00000018687 | Pfam | PF02257 | IPR003150 | 241 | 320 | 3.40e-35 | DNA-binding RFX-type winged-helix domain |
ENSCINP00000018687 | ProSiteProfiles | PS51526 | IPR003150 | 244 | 319 | 0.00e-00 | DNA-binding RFX-type winged-helix domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSCINP00000018687 | PF02257 | 1.3e-35 | RFX_DNA_binding | RFX DNA-binding domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSCINP00000018687 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSCINP00000018687 | GO:0005634 | cellular_component | nucleus |
ENSCINP00000018687 | GO:0003677 | molecular_function | DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9986 | Oryctolagus cuniculus | 100009410 | 7425 | Nasonia vitripennis | 100121130 |
7029 | Acyrthosiphon pisum | 100159044 | 10224 | Saccoglossus kowalevskii | 100372282 |
30195 | Bombus terrestris | 100642228 | 9785 | Loxodonta africana | 100653791 |
8128 | Oreochromis niloticus | 100699291 | 143995 | Megachile rotundata | 100876007 |
34638 | Metaseiulus occidentalis | 100908403 | 9555 | Papio anubis | 101014246 |
31033 | Takifugu rubripes | 101070254 | 9685 | Felis catus | 101089969 |
10090 | Mus musculus | 19726 | 10116 | Rattus norvegicus | 288906 |
28377 | Anolis carolinensis | ENSACAG00000015355 | 9913 | Bos taurus | ENSBTAG00000000819 |
6087 | Hydra magnipapillata | 100203968 | 9646 | Ailuropoda melanoleuca | 100472256 |
9823 | Sus scrofa | 100511439 | 400682 | Amphimedon queenslandica | 100638336 |
132113 | Bombus impatiens | 100749382 | 10029 | Cricetulus griseus | 100767562 |
7463 | Apis florea | 100864431 | 9597 | Pan paniscus | 100974143 |
39432 | Saimiri boliviensis | 101052699 | 9669 | Mustela putorius furo | 101676154 |
8083 | Xiphophorus maculatus | 102228455 | 7227 | Drosophila melanogaster | 41266 |
7668 | Strongylocentrotus purpuratus | 586051 | 9606 | Homo sapiens | 5991 |
7070 | Tribolium castaneum | 664071 | 9615 | Canis familiaris | ENSCAFG00000002053 |
9358 | Choloepus hoffmanni | ENSCHOG00000008113 | 10141 | Cavia porcellus | ENSCPOG00000010089 |
7955 | Danio rerio | ENSDARG00000014550 | 9361 | Dasypus novemcinctus | ENSDNOG00000018668 |
10020 | Dipodomys ordii | ENSDORG00000016506 | 9796 | Equus caballus | ENSECAG00000011075 |
9371 | Echinops telfairi | ENSETEG00000003677 | 69293 | Gasterosteus aculeatus | ENSGACG00000007541 |
9031 | Gallus gallus | ENSGALG00000012647 | 9595 | Gorilla gorilla | ENSGGOG00000003805 |
8049 | Gadus morhua | ENSGMOG00000010985 | 9103 | Meleagris gallopavo | ENSMGAG00000001572 |
30608 | Microcebus murinus | ENSMICG00000004022 | 59463 | Myotis lucifugus | ENSMLUG00000013765 |
9544 | Macaca mulatta | ENSMMUG00000000802 | 13616 | Monodelphis domestica | ENSMODG00000015410 |
30611 | Otolemur garnettii | ENSOGAG00000007762 | 9978 | Ochotona princeps | ENSOPRG00000003641 |
8090 | Oryzias latipes | ENSORLG00000007747 | 7757 | Petromyzon marinus | ENSPMAG00000002263 |
9601 | Pongo abelii | ENSPPYG00000019253 | 13735 | Pelodiscus sinensis | ENSPSIG00000005608 |
9598 | Pan troglodytes | ENSPTRG00000010352 | 132908 | Pteropus vampyrus | ENSPVAG00000017549 |
42254 | Sorex araneus | ENSSARG00000013845 | 9305 | Sarcophilus harrisii | ENSSHAG00000003775 |
43179 | Ictidomys tridecemlineatus | ENSSTOG00000006974 | 37347 | Tupaia belangeri | ENSTBEG00000014646 |
59729 | Taeniopygia guttata | ENSTGUG00000000369 | 9739 | Tursiops truncatus | ENSTTRG00000008377 |
30538 | Vicugna pacos | ENSVPAG00000005472 | 8364 | Xenopus tropicalis | ENSXETG00000011698 |
9483 | Callithrix jacchus | ENSCJAG00000016750 | 51511 | Ciona savignyi | ENSCSAVG00000006455 |
9365 | Erinaceus europaeus | ENSEEUG00000013595 | 7897 | Latimeria chalumnae | ENSLACG00000011846 |
9315 | Macropus eugenii | ENSMEUG00000009014 | 61853 | Nomascus leucogenys | ENSNLEG00000015842 |
9258 | Ornithorhynchus anatinus | ENSOANG00000014996 | 9813 | Procavia capensis | ENSPCAG00000010006 |
99883 | Tetraodon nigroviridis | ENSTNIG00000018128 | 9478 | Tarsius syrichta | ENSTSYG00000006974 |