Basic Information
Gene ID 780712
Gene Name Ci-HNF4; hnf4
Full Name Nuclear receptor
Organism Ciona intestinalis [7719]

Cross Reference
UniProt Q4H3D4 UniGene Cin.3727
PDB NULL OMIM NULL
KEGG cin:780712 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING 7719.ENSCINP00000019455

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSCINP00000019457 Gene3D G3DSA:1.10.565.10 IPR008946 123 377 2.70e-71 Nuclear hormone receptor, ligand-binding
ENSCINP00000019457 Gene3D G3DSA:3.30.50.10 IPR013088 58 122 1.70e-31 Zinc finger, NHR/GATA-type
ENSCINP00000019457 Pfam PF00104 IPR000536 182 363 6.10e-37 Nuclear hormone receptor, ligand-binding, core
ENSCINP00000019457 Pfam PF00105 IPR001628 59 127 2.00e-29 Zinc finger, nuclear hormone receptor-type
ENSCINP00000019457 PRINTS PR00047 IPR001628 109 117 3.20e-18 Zinc finger, nuclear hormone receptor-type
ENSCINP00000019457 PRINTS PR00047 IPR001628 117 125 3.20e-18 Zinc finger, nuclear hormone receptor-type
ENSCINP00000019457 PRINTS PR00047 IPR001628 60 76 3.20e-18 Zinc finger, nuclear hormone receptor-type
ENSCINP00000019457 PRINTS PR00047 IPR001628 76 91 3.20e-18 Zinc finger, nuclear hormone receptor-type
ENSCINP00000019457 PRINTS PR00398 IPR001723 121 131 1.70e-25 Steroid hormone receptor
ENSCINP00000019457 PRINTS PR00398 IPR001723 193 214 1.70e-25 Steroid hormone receptor
ENSCINP00000019457 PRINTS PR00398 IPR001723 214 230 1.70e-25 Steroid hormone receptor
ENSCINP00000019457 PRINTS PR00398 IPR001723 281 296 1.70e-25 Steroid hormone receptor
ENSCINP00000019457 PRINTS PR00398 IPR001723 338 355 1.70e-25 Steroid hormone receptor
ENSCINP00000019457 PRINTS PR00545 IPR000003 128 141 3.10e-06 Retinoid X receptor/HNF4
ENSCINP00000019457 PRINTS PR00545 IPR000003 269 287 3.10e-06 Retinoid X receptor/HNF4
ENSCINP00000019457 PRINTS PR00545 IPR000003 310 329 3.10e-06 Retinoid X receptor/HNF4
ENSCINP00000019457 ProSitePatterns PS00031 IPR001628 60 86 - Zinc finger, nuclear hormone receptor-type
ENSCINP00000019457 ProSiteProfiles PS51030 IPR001628 57 132 0.00e-00 Zinc finger, nuclear hormone receptor-type
ENSCINP00000019457 SMART SM00399 IPR001628 57 128 2.30e-40 Zinc finger, nuclear hormone receptor-type
ENSCINP00000019457 SMART SM00430 IPR000536 192 350 8.90e-48 Nuclear hormone receptor, ligand-binding, core
ENSCINP00000019457 SUPERFAMILY SSF48508 IPR008946 151 377 0.00e-00 Nuclear hormone receptor, ligand-binding

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSCINP00000019457 PF00104 4.1e-37 Hormone_recep Ligand-binding domain of nuclear hormone receptor
ENSCINP00000019457 PF00105 1.2e-29 zf-C4 Zinc finger, C4 type (two domains)

Gene Ontology Annotation
Protein Entry Name Space Description
ENSCINP00000019457 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity
ENSCINP00000019457 GO:0003707 molecular_function steroid hormone receptor activity
ENSCINP00000019457 GO:0008270 molecular_function zinc ion binding
ENSCINP00000019457 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
7460 Apis mellifera 409227 9598 Pan troglodytes 472799
9796 Equus caballus 100050783 7029 Acyrthosiphon pisum 100168732
6087 Hydra magnipapillata 100197146 10224 Saccoglossus kowalevskii 100378202
30195 Bombus terrestris 100646806 132113 Bombus impatiens 100748857
10029 Cricetulus griseus 100751997 7463 Apis florea 100872065
143995 Megachile rotundata 100879907 34638 Metaseiulus occidentalis 100907131
9597 Pan paniscus 100990137 9555 Papio anubis 101000983
39432 Saimiri boliviensis 101053703 9669 Mustela putorius furo 101682415
13735 Pelodiscus sinensis 102450583 6239 Caenorhabditis elegans 172840
10116 Rattus norvegicus 25735 10090 Mus musculus 30942
9031 Gallus gallus 415820 7227 Drosophila melanogaster 44544
9823 Sus scrofa 445465 9615 Canis familiaris 487005
7668 Strongylocentrotus purpuratus 574894 7070 Tribolium castaneum 657032
9544 Macaca mulatta 697750 28377 Anolis carolinensis ENSACAG00000014360
9646 Ailuropoda melanoleuca ENSAMEG00000000001 9358 Choloepus hoffmanni ENSCHOG00000000938
9483 Callithrix jacchus ENSCJAG00000017746 10141 Cavia porcellus ENSCPOG00000011625
51511 Ciona savignyi ENSCSAVG00000009430 7955 Danio rerio ENSDARG00000021494
9361 Dasypus novemcinctus ENSDNOG00000015431 10020 Dipodomys ordii ENSDORG00000005971
9365 Erinaceus europaeus ENSEEUG00000009253 9371 Echinops telfairi ENSETEG00000003448
9685 Felis catus ENSFCAG00000025545 69293 Gasterosteus aculeatus ENSGACG00000011485
9595 Gorilla gorilla ENSGGOG00000008488 7897 Latimeria chalumnae ENSLACG00000000130
9315 Macropus eugenii ENSMEUG00000001256 9103 Meleagris gallopavo ENSMGAG00000007214
30608 Microcebus murinus ENSMICG00000008240 59463 Myotis lucifugus ENSMLUG00000004011
13616 Monodelphis domestica ENSMODG00000006805 61853 Nomascus leucogenys ENSNLEG00000001920
9258 Ornithorhynchus anatinus ENSOANG00000011349 9986 Oryctolagus cuniculus ENSOCUG00000006841
30611 Otolemur garnettii ENSOGAG00000010660 8128 Oreochromis niloticus ENSONIG00000016515
9978 Ochotona princeps ENSOPRG00000014280 8090 Oryzias latipes ENSORLG00000006996
9813 Procavia capensis ENSPCAG00000010776 7757 Petromyzon marinus ENSPMAG00000005852
9601 Pongo abelii ENSPPYG00000011031 132908 Pteropus vampyrus ENSPVAG00000001778
42254 Sorex araneus ENSSARG00000004618 9305 Sarcophilus harrisii ENSSHAG00000009578
43179 Ictidomys tridecemlineatus ENSSTOG00000007181 37347 Tupaia belangeri ENSTBEG00000010662
59729 Taeniopygia guttata ENSTGUG00000004174 99883 Tetraodon nigroviridis ENSTNIG00000012436
9739 Tursiops truncatus ENSTTRG00000003691 30538 Vicugna pacos ENSVPAG00000009648
8364 Xenopus tropicalis ENSXETG00000016389 8083 Xiphophorus maculatus ENSXMAG00000001220
8049 Gadus morhua ENSGMOG00000011421 9785 Loxodonta africana ENSLAFG00000020911
31033 Takifugu rubripes ENSTRUG00000009982 9478 Tarsius syrichta ENSTSYG00000007661