Basic Information | |||
Gene ID | 780712 | ||
Gene Name | Ci-HNF4; hnf4 | ||
Full Name | Nuclear receptor | ||
Organism | Ciona intestinalis [7719] |
Cross Reference | |||
UniProt | Q4H3D4 | UniGene | Cin.3727 |
PDB | NULL | OMIM | NULL |
KEGG | cin:780712 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | 7719.ENSCINP00000019455 |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSCINP00000019457 | Gene3D | G3DSA:1.10.565.10 | IPR008946 | 123 | 377 | 2.70e-71 | Nuclear hormone receptor, ligand-binding |
ENSCINP00000019457 | Gene3D | G3DSA:3.30.50.10 | IPR013088 | 58 | 122 | 1.70e-31 | Zinc finger, NHR/GATA-type |
ENSCINP00000019457 | Pfam | PF00104 | IPR000536 | 182 | 363 | 6.10e-37 | Nuclear hormone receptor, ligand-binding, core |
ENSCINP00000019457 | Pfam | PF00105 | IPR001628 | 59 | 127 | 2.00e-29 | Zinc finger, nuclear hormone receptor-type |
ENSCINP00000019457 | PRINTS | PR00047 | IPR001628 | 109 | 117 | 3.20e-18 | Zinc finger, nuclear hormone receptor-type |
ENSCINP00000019457 | PRINTS | PR00047 | IPR001628 | 117 | 125 | 3.20e-18 | Zinc finger, nuclear hormone receptor-type |
ENSCINP00000019457 | PRINTS | PR00047 | IPR001628 | 60 | 76 | 3.20e-18 | Zinc finger, nuclear hormone receptor-type |
ENSCINP00000019457 | PRINTS | PR00047 | IPR001628 | 76 | 91 | 3.20e-18 | Zinc finger, nuclear hormone receptor-type |
ENSCINP00000019457 | PRINTS | PR00398 | IPR001723 | 121 | 131 | 1.70e-25 | Steroid hormone receptor |
ENSCINP00000019457 | PRINTS | PR00398 | IPR001723 | 193 | 214 | 1.70e-25 | Steroid hormone receptor |
ENSCINP00000019457 | PRINTS | PR00398 | IPR001723 | 214 | 230 | 1.70e-25 | Steroid hormone receptor |
ENSCINP00000019457 | PRINTS | PR00398 | IPR001723 | 281 | 296 | 1.70e-25 | Steroid hormone receptor |
ENSCINP00000019457 | PRINTS | PR00398 | IPR001723 | 338 | 355 | 1.70e-25 | Steroid hormone receptor |
ENSCINP00000019457 | PRINTS | PR00545 | IPR000003 | 128 | 141 | 3.10e-06 | Retinoid X receptor/HNF4 |
ENSCINP00000019457 | PRINTS | PR00545 | IPR000003 | 269 | 287 | 3.10e-06 | Retinoid X receptor/HNF4 |
ENSCINP00000019457 | PRINTS | PR00545 | IPR000003 | 310 | 329 | 3.10e-06 | Retinoid X receptor/HNF4 |
ENSCINP00000019457 | ProSitePatterns | PS00031 | IPR001628 | 60 | 86 | - | Zinc finger, nuclear hormone receptor-type |
ENSCINP00000019457 | ProSiteProfiles | PS51030 | IPR001628 | 57 | 132 | 0.00e-00 | Zinc finger, nuclear hormone receptor-type |
ENSCINP00000019457 | SMART | SM00399 | IPR001628 | 57 | 128 | 2.30e-40 | Zinc finger, nuclear hormone receptor-type |
ENSCINP00000019457 | SMART | SM00430 | IPR000536 | 192 | 350 | 8.90e-48 | Nuclear hormone receptor, ligand-binding, core |
ENSCINP00000019457 | SUPERFAMILY | SSF48508 | IPR008946 | 151 | 377 | 0.00e-00 | Nuclear hormone receptor, ligand-binding |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSCINP00000019457 | PF00104 | 4.1e-37 | Hormone_recep | Ligand-binding domain of nuclear hormone receptor |
ENSCINP00000019457 | PF00105 | 1.2e-29 | zf-C4 | Zinc finger, C4 type (two domains) |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSCINP00000019457 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
ENSCINP00000019457 | GO:0003707 | molecular_function | steroid hormone receptor activity |
ENSCINP00000019457 | GO:0008270 | molecular_function | zinc ion binding |
ENSCINP00000019457 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
7460 | Apis mellifera | 409227 | 9598 | Pan troglodytes | 472799 |
9796 | Equus caballus | 100050783 | 7029 | Acyrthosiphon pisum | 100168732 |
6087 | Hydra magnipapillata | 100197146 | 10224 | Saccoglossus kowalevskii | 100378202 |
30195 | Bombus terrestris | 100646806 | 132113 | Bombus impatiens | 100748857 |
10029 | Cricetulus griseus | 100751997 | 7463 | Apis florea | 100872065 |
143995 | Megachile rotundata | 100879907 | 34638 | Metaseiulus occidentalis | 100907131 |
9597 | Pan paniscus | 100990137 | 9555 | Papio anubis | 101000983 |
39432 | Saimiri boliviensis | 101053703 | 9669 | Mustela putorius furo | 101682415 |
13735 | Pelodiscus sinensis | 102450583 | 6239 | Caenorhabditis elegans | 172840 |
10116 | Rattus norvegicus | 25735 | 10090 | Mus musculus | 30942 |
9031 | Gallus gallus | 415820 | 7227 | Drosophila melanogaster | 44544 |
9823 | Sus scrofa | 445465 | 9615 | Canis familiaris | 487005 |
7668 | Strongylocentrotus purpuratus | 574894 | 7070 | Tribolium castaneum | 657032 |
9544 | Macaca mulatta | 697750 | 28377 | Anolis carolinensis | ENSACAG00000014360 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000000001 | 9358 | Choloepus hoffmanni | ENSCHOG00000000938 |
9483 | Callithrix jacchus | ENSCJAG00000017746 | 10141 | Cavia porcellus | ENSCPOG00000011625 |
51511 | Ciona savignyi | ENSCSAVG00000009430 | 7955 | Danio rerio | ENSDARG00000021494 |
9361 | Dasypus novemcinctus | ENSDNOG00000015431 | 10020 | Dipodomys ordii | ENSDORG00000005971 |
9365 | Erinaceus europaeus | ENSEEUG00000009253 | 9371 | Echinops telfairi | ENSETEG00000003448 |
9685 | Felis catus | ENSFCAG00000025545 | 69293 | Gasterosteus aculeatus | ENSGACG00000011485 |
9595 | Gorilla gorilla | ENSGGOG00000008488 | 7897 | Latimeria chalumnae | ENSLACG00000000130 |
9315 | Macropus eugenii | ENSMEUG00000001256 | 9103 | Meleagris gallopavo | ENSMGAG00000007214 |
30608 | Microcebus murinus | ENSMICG00000008240 | 59463 | Myotis lucifugus | ENSMLUG00000004011 |
13616 | Monodelphis domestica | ENSMODG00000006805 | 61853 | Nomascus leucogenys | ENSNLEG00000001920 |
9258 | Ornithorhynchus anatinus | ENSOANG00000011349 | 9986 | Oryctolagus cuniculus | ENSOCUG00000006841 |
30611 | Otolemur garnettii | ENSOGAG00000010660 | 8128 | Oreochromis niloticus | ENSONIG00000016515 |
9978 | Ochotona princeps | ENSOPRG00000014280 | 8090 | Oryzias latipes | ENSORLG00000006996 |
9813 | Procavia capensis | ENSPCAG00000010776 | 7757 | Petromyzon marinus | ENSPMAG00000005852 |
9601 | Pongo abelii | ENSPPYG00000011031 | 132908 | Pteropus vampyrus | ENSPVAG00000001778 |
42254 | Sorex araneus | ENSSARG00000004618 | 9305 | Sarcophilus harrisii | ENSSHAG00000009578 |
43179 | Ictidomys tridecemlineatus | ENSSTOG00000007181 | 37347 | Tupaia belangeri | ENSTBEG00000010662 |
59729 | Taeniopygia guttata | ENSTGUG00000004174 | 99883 | Tetraodon nigroviridis | ENSTNIG00000012436 |
9739 | Tursiops truncatus | ENSTTRG00000003691 | 30538 | Vicugna pacos | ENSVPAG00000009648 |
8364 | Xenopus tropicalis | ENSXETG00000016389 | 8083 | Xiphophorus maculatus | ENSXMAG00000001220 |
8049 | Gadus morhua | ENSGMOG00000011421 | 9785 | Loxodonta africana | ENSLAFG00000020911 |
31033 | Takifugu rubripes | ENSTRUG00000009982 | 9478 | Tarsius syrichta | ENSTSYG00000007661 |