Basic Information | |||
Gene ID | 445465 | ||
Gene Name | RXRG; NR2B3 | ||
Full Name | Retinoic acid receptor RXR-gamma | ||
Organism | Sus scrofa [9823] |
Cross Reference | |||
UniProt | Q0GFF6 | UniGene | Ssc.19608 |
PDB | NULL | OMIM | NULL |
KEGG | ssc:445465 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | 9823.ENSSSCP00000006747 |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSSSCP00000006747 | Gene3D | G3DSA:1.10.565.10 | IPR008946 | 233 | 459 | 9.40e-104 | Nuclear hormone receptor, ligand-binding |
ENSSSCP00000006747 | Gene3D | G3DSA:3.30.50.10 | IPR013088 | 135 | 217 | 1.40e-33 | Zinc finger, NHR/GATA-type |
ENSSSCP00000006747 | Pfam | PF00104 | IPR000536 | 261 | 443 | 1.10e-40 | Nuclear hormone receptor, ligand-binding, core |
ENSSSCP00000006747 | Pfam | PF00105 | IPR001628 | 138 | 206 | 1.90e-31 | Zinc finger, nuclear hormone receptor-type |
ENSSSCP00000006747 | Pfam | PF11825 | IPR021780 | 24 | 134 | 7.10e-32 | Nuclear/hormone receptor activator site AF-1 |
ENSSSCP00000006747 | PRINTS | PR00047 | IPR001628 | 139 | 155 | 1.40e-18 | Zinc finger, nuclear hormone receptor-type |
ENSSSCP00000006747 | PRINTS | PR00047 | IPR001628 | 155 | 170 | 1.40e-18 | Zinc finger, nuclear hormone receptor-type |
ENSSSCP00000006747 | PRINTS | PR00047 | IPR001628 | 188 | 196 | 1.40e-18 | Zinc finger, nuclear hormone receptor-type |
ENSSSCP00000006747 | PRINTS | PR00047 | IPR001628 | 196 | 204 | 1.40e-18 | Zinc finger, nuclear hormone receptor-type |
ENSSSCP00000006747 | PRINTS | PR00398 | IPR001723 | 200 | 210 | 5.40e-35 | Steroid hormone receptor |
ENSSSCP00000006747 | PRINTS | PR00398 | IPR001723 | 272 | 293 | 5.40e-35 | Steroid hormone receptor |
ENSSSCP00000006747 | PRINTS | PR00398 | IPR001723 | 293 | 309 | 5.40e-35 | Steroid hormone receptor |
ENSSSCP00000006747 | PRINTS | PR00398 | IPR001723 | 361 | 376 | 5.40e-35 | Steroid hormone receptor |
ENSSSCP00000006747 | PRINTS | PR00398 | IPR001723 | 418 | 435 | 5.40e-35 | Steroid hormone receptor |
ENSSSCP00000006747 | PRINTS | PR00545 | IPR000003 | 207 | 220 | 1.90e-39 | Retinoid X receptor/HNF4 |
ENSSSCP00000006747 | PRINTS | PR00545 | IPR000003 | 323 | 348 | 1.90e-39 | Retinoid X receptor/HNF4 |
ENSSSCP00000006747 | PRINTS | PR00545 | IPR000003 | 349 | 367 | 1.90e-39 | Retinoid X receptor/HNF4 |
ENSSSCP00000006747 | PRINTS | PR00545 | IPR000003 | 390 | 409 | 1.90e-39 | Retinoid X receptor/HNF4 |
ENSSSCP00000006747 | ProSitePatterns | PS00031 | IPR001628 | 139 | 165 | - | Zinc finger, nuclear hormone receptor-type |
ENSSSCP00000006747 | ProSiteProfiles | PS51030 | IPR001628 | 136 | 211 | 0.00e-00 | Zinc finger, nuclear hormone receptor-type |
ENSSSCP00000006747 | SMART | SM00399 | IPR001628 | 136 | 207 | 2.30e-41 | Zinc finger, nuclear hormone receptor-type |
ENSSSCP00000006747 | SMART | SM00430 | IPR000536 | 271 | 430 | 9.00e-53 | Nuclear hormone receptor, ligand-binding, core |
ENSSSCP00000006747 | SUPERFAMILY | SSF48508 | IPR008946 | 189 | 457 | 0.00e-00 | Nuclear hormone receptor, ligand-binding |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSSSCP00000006747 | PF00104 | 7.89996e-41 | Hormone_recep | Ligand-binding domain of nuclear hormone receptor |
ENSSSCP00000006747 | PF11825 | 3.3e-32 | Nuc_recep-AF1 | Nuclear/hormone receptor activator site AF-1 |
ENSSSCP00000006747 | PF00105 | 1.1e-31 | zf-C4 | Zinc finger, C4 type (two domains) |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSSSCP00000006747 | GO:0005634 | cellular_component | nucleus |
ENSSSCP00000006747 | GO:0003707 | molecular_function | steroid hormone receptor activity |
ENSSSCP00000006747 | GO:0008270 | molecular_function | zinc ion binding |
ENSSSCP00000006747 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9258 | Ornithorhynchus anatinus | 100074625 | 7425 | Nasonia vitripennis | 100118473 |
7029 | Acyrthosiphon pisum | 100164958 | 9483 | Callithrix jacchus | 100386851 |
61853 | Nomascus leucogenys | 100592610 | 30195 | Bombus terrestris | 100651492 |
132113 | Bombus impatiens | 100749223 | 10029 | Cricetulus griseus | 100751997 |
143995 | Megachile rotundata | 100877684 | 34638 | Metaseiulus occidentalis | 100897482 |
9597 | Pan paniscus | 100992346 | 39432 | Saimiri boliviensis | 101040247 |
9685 | Felis catus | 101081273 | 9595 | Gorilla gorilla | 101152695 |
9669 | Mustela putorius furo | 101693923 | 43179 | Ictidomys tridecemlineatus | 101957499 |
8083 | Xiphophorus maculatus | 102222228 | 13735 | Pelodiscus sinensis | 102447903 |
10090 | Mus musculus | 20181 | 7227 | Drosophila melanogaster | 31165 |
7460 | Apis mellifera | 409227 | 7955 | Danio rerio | 436617 |
10224 | Saccoglossus kowalevskii | 100329058 | 7463 | Apis florea | 100871050 |
9555 | Papio anubis | 101015058 | 132908 | Pteropus vampyrus | ENSPVAG00000007457 |
9305 | Sarcophilus harrisii | ENSSHAG00000015367 | 30538 | Vicugna pacos | ENSVPAG00000004578 |
9598 | Pan troglodytes | 457476 | 9615 | Canis familiaris | 478989 |
7668 | Strongylocentrotus purpuratus | 579018 | 9606 | Homo sapiens | 6258 |
7070 | Tribolium castaneum | 661207 | 9544 | Macaca mulatta | 694807 |
8364 | Xenopus tropicalis | 779621 | 7719 | Ciona intestinalis | 780712 |
10116 | Rattus norvegicus | 83574 | 28377 | Anolis carolinensis | ENSACAG00000007923 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000006616 | 9913 | Bos taurus | ENSBTAG00000017851 |
9358 | Choloepus hoffmanni | ENSCHOG00000009952 | 10141 | Cavia porcellus | ENSCPOG00000000168 |
51511 | Ciona savignyi | ENSCSAVG00000007831 | 10020 | Dipodomys ordii | ENSDORG00000014034 |
9796 | Equus caballus | ENSECAG00000024377 | 9365 | Erinaceus europaeus | ENSEEUG00000015558 |
9371 | Echinops telfairi | ENSETEG00000004886 | 69293 | Gasterosteus aculeatus | ENSGACG00000011685 |
9031 | Gallus gallus | ENSGALG00000003406 | 8049 | Gadus morhua | ENSGMOG00000018023 |
9785 | Loxodonta africana | ENSLAFG00000008059 | 9315 | Macropus eugenii | ENSMEUG00000013948 |
9103 | Meleagris gallopavo | ENSMGAG00000003715 | 30608 | Microcebus murinus | ENSMICG00000009970 |
59463 | Myotis lucifugus | ENSMLUG00000010476 | 13616 | Monodelphis domestica | ENSMODG00000001291 |
9986 | Oryctolagus cuniculus | ENSOCUG00000005512 | 30611 | Otolemur garnettii | ENSOGAG00000011318 |
8128 | Oreochromis niloticus | ENSONIG00000002143 | 9978 | Ochotona princeps | ENSOPRG00000014490 |
8090 | Oryzias latipes | ENSORLG00000016690 | 9813 | Procavia capensis | ENSPCAG00000008619 |
7757 | Petromyzon marinus | ENSPMAG00000007822 | 9601 | Pongo abelii | ENSPPYG00000000571 |
37347 | Tupaia belangeri | ENSTBEG00000002797 | 59729 | Taeniopygia guttata | ENSTGUG00000005800 |
99883 | Tetraodon nigroviridis | ENSTNIG00000018446 | 31033 | Takifugu rubripes | ENSTRUG00000006878 |
9478 | Tarsius syrichta | ENSTSYG00000002120 | 9739 | Tursiops truncatus | ENSTTRG00000003653 |
Paralogs | |||
100156801 |