Basic Information
Gene ID ENSPMAG00000004511
Gene Name PRDM1 (3 of 3)
Full Name Uncharacterized protein
Organism Petromyzon marinus [7757]

Cross Reference
UniProt S4RIC8 UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSPMAP00000004960 Gene3D G3DSA:3.30.160.60 IPR013087 425 454 2.70e-14 Zinc finger C2H2-type/integrase DNA-binding domain
ENSPMAP00000004960 Gene3D G3DSA:3.30.160.60 IPR013087 455 477 4.80e-11 Zinc finger C2H2-type/integrase DNA-binding domain
ENSPMAP00000004960 Gene3D G3DSA:3.30.160.60 IPR013087 478 497 1.40e-08 Zinc finger C2H2-type/integrase DNA-binding domain
ENSPMAP00000004960 Gene3D G3DSA:3.30.160.60 IPR013087 508 542 5.20e-06 Zinc finger C2H2-type/integrase DNA-binding domain
ENSPMAP00000004960 ProSitePatterns PS00028 IPR007087 427 447 - Zinc finger, C2H2
ENSPMAP00000004960 ProSiteProfiles PS50157 IPR007087 425 452 0.00e-00 Zinc finger, C2H2
ENSPMAP00000004960 ProSiteProfiles PS50157 IPR007087 453 479 0.00e-00 Zinc finger, C2H2
ENSPMAP00000004960 ProSiteProfiles PS50157 IPR007087 480 521 0.00e-00 Zinc finger, C2H2
ENSPMAP00000004960 ProSiteProfiles PS50280 IPR001214 1 67 0.00e-00 SET domain
ENSPMAP00000004960 SMART SM00355 IPR015880 425 447 1.30e-06 Zinc finger, C2H2-like
ENSPMAP00000004960 SMART SM00355 IPR015880 453 474 1.80e-02 Zinc finger, C2H2-like
ENSPMAP00000004960 SMART SM00355 IPR015880 480 516 2.90e-01 Zinc finger, C2H2-like
ENSPMAP00000004960 SMART SM00355 IPR015880 522 542 1.40e-01 Zinc finger, C2H2-like

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSPMAP00000004960 PF13465 9.2e-18 zf-H2C2_2 Zinc-finger double domain
ENSPMAP00000004960 PF00096 7.6e-12 zf-C2H2 Zinc finger, C2H2 type
ENSPMAP00000004960 PF13894 2.6e-09 zf-C2H2_4 C2H2-type zinc finger
ENSPMAP00000004960 PF13912 7.7e-05 zf-C2H2_6 C2H2-type zinc finger

Gene Ontology Annotation
Protein Entry Name Space Description
ENSPMAP00000004960 GO:0006351 biological_process transcription, DNA-templated
ENSPMAP00000004960 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSPMAP00000004960 GO:0005634 cellular_component nucleus
ENSPMAP00000004960 GO:0003677 molecular_function DNA binding
ENSPMAP00000004960 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity
ENSPMAP00000004960 GO:0046872 molecular_function metal ion binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
9796 Equus caballus 100071967 9823 Sus scrofa 100154284
61853 Nomascus leucogenys 100585120 9597 Pan paniscus 100979416
39432 Saimiri boliviensis 101033194 43179 Ictidomys tridecemlineatus 101977297
10141 Cavia porcellus ENSCPOG00000014064 10029 Cricetulus griseus 100759446
9555 Papio anubis 101009742 9595 Gorilla gorilla 101142019
10090 Mus musculus 12142 10116 Rattus norvegicus 309871
9606 Homo sapiens 639 9785 Loxodonta africana ENSLAFG00000013436
59463 Myotis lucifugus ENSMLUG00000014085 9813 Procavia capensis ENSPCAG00000009179
9478 Tarsius syrichta ENSTSYG00000011666 37347 Tupaia belangeri ENSTBEG00000004089
9739 Tursiops truncatus ENSTTRG00000012894