Basic Information
Gene ID 100154284
Gene Name PRDM1
Full Name Uncharacterized protein
Organism Sus scrofa [9823]

Cross Reference
UniProt F1RYP9 UniGene NULL
PDB NULL OMIM NULL
KEGG ssc:100154284 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSSSCP00000004716 Gene3D G3DSA:3.30.160.60 IPR013087 579 608 2.00e-14 Zinc finger C2H2-type/integrase DNA-binding domain
ENSSSCP00000004716 Gene3D G3DSA:3.30.160.60 IPR013087 609 628 5.60e-13 Zinc finger C2H2-type/integrase DNA-binding domain
ENSSSCP00000004716 Gene3D G3DSA:3.30.160.60 IPR013087 629 660 3.60e-16 Zinc finger C2H2-type/integrase DNA-binding domain
ENSSSCP00000004716 Gene3D G3DSA:3.30.160.60 IPR013087 661 683 1.00e-09 Zinc finger C2H2-type/integrase DNA-binding domain
ENSSSCP00000004716 Gene3D G3DSA:3.30.160.60 IPR013087 684 713 2.20e-06 Zinc finger C2H2-type/integrase DNA-binding domain
ENSSSCP00000004716 Pfam PF00856 IPR001214 100 200 1.10e-07 SET domain
ENSSSCP00000004716 PIRSF PIRSF013212 IPR016608 2 828 0.00e-00 PR-domain zinc finger protein PRDM1
ENSSSCP00000004716 ProSitePatterns PS00028 IPR007087 581 601 - Zinc finger, C2H2
ENSSSCP00000004716 ProSitePatterns PS00028 IPR007087 609 629 - Zinc finger, C2H2
ENSSSCP00000004716 ProSitePatterns PS00028 IPR007087 637 657 - Zinc finger, C2H2
ENSSSCP00000004716 ProSitePatterns PS00028 IPR007087 665 685 - Zinc finger, C2H2
ENSSSCP00000004716 ProSitePatterns PS00028 IPR007087 693 713 - Zinc finger, C2H2
ENSSSCP00000004716 ProSiteProfiles PS50157 IPR007087 579 606 0.00e-00 Zinc finger, C2H2
ENSSSCP00000004716 ProSiteProfiles PS50157 IPR007087 607 634 0.00e-00 Zinc finger, C2H2
ENSSSCP00000004716 ProSiteProfiles PS50157 IPR007087 635 662 0.00e-00 Zinc finger, C2H2
ENSSSCP00000004716 ProSiteProfiles PS50157 IPR007087 663 690 0.00e-00 Zinc finger, C2H2
ENSSSCP00000004716 ProSiteProfiles PS50157 IPR007087 691 718 0.00e-00 Zinc finger, C2H2
ENSSSCP00000004716 ProSiteProfiles PS50280 IPR001214 84 201 0.00e-00 SET domain
ENSSSCP00000004716 SMART SM00317 IPR001214 86 207 1.20e-23 SET domain
ENSSSCP00000004716 SMART SM00355 IPR015880 579 601 2.10e-06 Zinc finger, C2H2-like
ENSSSCP00000004716 SMART SM00355 IPR015880 607 629 1.30e-05 Zinc finger, C2H2-like
ENSSSCP00000004716 SMART SM00355 IPR015880 635 657 2.50e-05 Zinc finger, C2H2-like
ENSSSCP00000004716 SMART SM00355 IPR015880 663 685 4.70e-05 Zinc finger, C2H2-like
ENSSSCP00000004716 SMART SM00355 IPR015880 691 713 3.00e-02 Zinc finger, C2H2-like

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSSSCP00000004716 PF13465 6.7e-27 zf-H2C2_2 Zinc-finger double domain
ENSSSCP00000004716 PF00096 3.5e-15 zf-C2H2 Zinc finger, C2H2 type
ENSSSCP00000004716 PF13894 1.5e-11 zf-C2H2_4 C2H2-type zinc finger
ENSSSCP00000004716 PF00856 2.2e-08 SET SET domain
ENSSSCP00000004716 PF13912 0.00021 zf-C2H2_6 C2H2-type zinc finger

Gene Ontology Annotation
Protein Entry Name Space Description
ENSSSCP00000004716 GO:0006351 biological_process transcription, DNA-templated
ENSSSCP00000004716 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSSSCP00000004716 GO:0005634 cellular_component nucleus
ENSSSCP00000004716 GO:0003677 molecular_function DNA binding
ENSSSCP00000004716 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity
ENSSSCP00000004716 GO:0046872 molecular_function metal ion binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
7070 Tribolium castaneum 100142159 9796 Equus caballus 100071967
7425 Nasonia vitripennis 100123469 9601 Pongo abelii 100452654
61853 Nomascus leucogenys 100585120 30195 Bombus terrestris 100650488
8128 Oreochromis niloticus 100706221 132113 Bombus impatiens 100741638
10029 Cricetulus griseus 100759446 143995 Megachile rotundata 100877382
34638 Metaseiulus occidentalis 100906146 30611 Otolemur garnettii 100943698
9597 Pan paniscus 100979416 9555 Papio anubis 101009742
39432 Saimiri boliviensis 101033194 9595 Gorilla gorilla 101142019
9669 Mustela putorius furo 101675818 43179 Ictidomys tridecemlineatus 101977297
13735 Pelodiscus sinensis 102454613 10090 Mus musculus 12142
10116 Rattus norvegicus 309871 7955 Danio rerio 323473
7227 Drosophila melanogaster 38638 7460 Apis mellifera 408295
9031 Gallus gallus 445340 9615 Canis familiaris 481947
9606 Homo sapiens 639 7668 Strongylocentrotus purpuratus 751833
28377 Anolis carolinensis ENSACAG00000005496 9646 Ailuropoda melanoleuca ENSAMEG00000001482
9358 Choloepus hoffmanni ENSCHOG00000011220 9483 Callithrix jacchus ENSCJAG00000009793
51511 Ciona savignyi ENSCSAVG00000011146 10020 Dipodomys ordii ENSDORG00000014237
9365 Erinaceus europaeus ENSEEUG00000013222 9371 Echinops telfairi ENSETEG00000019669
9685 Felis catus ENSFCAG00000010755 69293 Gasterosteus aculeatus ENSGACG00000009358
8049 Gadus morhua ENSGMOG00000009730 9785 Loxodonta africana ENSLAFG00000013436
9315 Macropus eugenii ENSMEUG00000000043 9103 Meleagris gallopavo ENSMGAG00000013524
30608 Microcebus murinus ENSMICG00000010329 59463 Myotis lucifugus ENSMLUG00000014085
9258 Ornithorhynchus anatinus ENSOANG00000004176 9986 Oryctolagus cuniculus ENSOCUG00000016978
9978 Ochotona princeps ENSOPRG00000006055 8090 Oryzias latipes ENSORLG00000012948
9813 Procavia capensis ENSPCAG00000009179 7757 Petromyzon marinus ENSPMAG00000004511
132908 Pteropus vampyrus ENSPVAG00000011732 42254 Sorex araneus ENSSARG00000004079
37347 Tupaia belangeri ENSTBEG00000004089 59729 Taeniopygia guttata ENSTGUG00000012204
99883 Tetraodon nigroviridis ENSTNIG00000012300 31033 Takifugu rubripes ENSTRUG00000000404
9478 Tarsius syrichta ENSTSYG00000011666 9739 Tursiops truncatus ENSTTRG00000012894
30538 Vicugna pacos ENSVPAG00000011363 8364 Xenopus tropicalis ENSXETG00000008674
8083 Xiphophorus maculatus ENSXMAG00000013351 7029 Acyrthosiphon pisum 100159482
9913 Bos taurus ENSBTAG00000009631 10141 Cavia porcellus ENSCPOG00000014064
9544 Macaca mulatta ENSMMUG00000003420 9598 Pan troglodytes ENSPTRG00000000383

Paralogs
ENSSSCG00000023570