Basic Information | |||
Gene ID | ENSSHAG00000014034 | ||
Gene Name | HMGB1 | ||
Full Name | Uncharacterized protein | ||
Organism | Sarcophilus harrisii [9305] |
Cross Reference | |||
UniProt | G3WM40 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSSHAP00000016495 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 8 | 78 | 2.30e-29 | High mobility group box domain |
ENSSHAP00000016495 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 93 | 168 | 6.50e-32 | High mobility group box domain |
ENSSHAP00000016495 | Pfam | PF00505 | IPR009071 | 95 | 163 | 3.80e-27 | High mobility group box domain |
ENSSHAP00000016495 | Pfam | PF09011 | IPR009071 | 6 | 78 | 3.20e-27 | High mobility group box domain |
ENSSHAP00000016495 | ProSitePatterns | PS00353 | IPR017967 | 41 | 52 | - | HMG box A DNA-binding domain, conserved site |
ENSSHAP00000016495 | ProSiteProfiles | PS50118 | IPR009071 | 95 | 163 | 0.00e-00 | High mobility group box domain |
ENSSHAP00000016495 | ProSiteProfiles | PS50118 | IPR009071 | 9 | 79 | 0.00e-00 | High mobility group box domain |
ENSSHAP00000016495 | SMART | SM00398 | IPR009071 | 8 | 80 | 2.00e-28 | High mobility group box domain |
ENSSHAP00000016495 | SMART | SM00398 | IPR009071 | 94 | 164 | 1.30e-32 | High mobility group box domain |
ENSSHAP00000016495 | SUPERFAMILY | SSF47095 | IPR009071 | 3 | 81 | 0.00e-00 | High mobility group box domain |
ENSSHAP00000016495 | SUPERFAMILY | SSF47095 | IPR009071 | 78 | 164 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSSHAP00000016495 | PF09011 | 4.30199e-43 | HMG_box_2 | HMG-box domain |
ENSSHAP00000016495 | PF00505 | 8.29989e-42 | HMG_box | HMG (high mobility group) box |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSSHAP00000016495 | GO:0005634 | cellular_component | nucleus |
ENSSHAP00000016495 | GO:0005694 | cellular_component | chromosome |
ENSSHAP00000016495 | GO:0003677 | molecular_function | DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9796 | Equus caballus | 100033873 | 7425 | Nasonia vitripennis | 100122354 |
9555 | Papio anubis | 100137373 | 7029 | Acyrthosiphon pisum | 100167132 |
9483 | Callithrix jacchus | 100392312 | 400682 | Amphimedon queenslandica | 100635010 |
10141 | Cavia porcellus | 100718808 | 132113 | Bombus impatiens | 100749348 |
39432 | Saimiri boliviensis | 101045330 | 59463 | Myotis lucifugus | 102420405 |
13735 | Pelodiscus sinensis | 102454149 | 7227 | Drosophila melanogaster | 117294 |
10090 | Mus musculus | 15289 | 9606 | Homo sapiens | 3146 |
9823 | Sus scrofa | 445521 | 51511 | Ciona savignyi | ENSCSAVG00000000341 |
9361 | Dasypus novemcinctus | ENSDNOG00000005537 | 9595 | Gorilla gorilla | ENSGGOG00000025109 |
9315 | Macropus eugenii | ENSMEUG00000001380 | 30608 | Microcebus murinus | ENSMICG00000007144 |
9986 | Oryctolagus cuniculus | ENSOCUG00000021335 | 30611 | Otolemur garnettii | ENSOGAG00000003205 |
10116 | Rattus norvegicus | ENSRNOG00000038953 | 6087 | Hydra magnipapillata | 100204109 |
9601 | Pongo abelii | 100461759 | 9103 | Meleagris gallopavo | 100543659 |
10029 | Cricetulus griseus | 100772377 | 7463 | Apis florea | 100871828 |
143995 | Megachile rotundata | 100876876 | 34638 | Metaseiulus occidentalis | 100900993 |
9597 | Pan paniscus | 100971286 | 8083 | Xiphophorus maculatus | 102238067 |
7897 | Latimeria chalumnae | 102366474 | 9913 | Bos taurus | 282691 |
7668 | Strongylocentrotus purpuratus | 373332 | 8364 | Xenopus tropicalis | 394834 |
7070 | Tribolium castaneum | 662763 | 9544 | Macaca mulatta | 712849 |
7460 | Apis mellifera | 725551 | 9598 | Pan troglodytes | 736904 |
7719 | Ciona intestinalis | 778643 | 28377 | Anolis carolinensis | ENSACAG00000005092 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000011652 | 9615 | Canis familiaris | ENSCAFG00000023930 |
9358 | Choloepus hoffmanni | ENSCHOG00000002423 | 7955 | Danio rerio | ENSDARG00000029722 |
10020 | Dipodomys ordii | ENSDORG00000010826 | 9371 | Echinops telfairi | ENSETEG00000004048 |
9685 | Felis catus | ENSFCAG00000000200 | 69293 | Gasterosteus aculeatus | ENSGACG00000020545 |
8049 | Gadus morhua | ENSGMOG00000019231 | 13616 | Monodelphis domestica | ENSMODG00000009238 |
9258 | Ornithorhynchus anatinus | ENSOANG00000014719 | 8128 | Oreochromis niloticus | ENSONIG00000006737 |
9978 | Ochotona princeps | ENSOPRG00000003507 | 8090 | Oryzias latipes | ENSORLG00000003951 |
9813 | Procavia capensis | ENSPCAG00000002201 | 7757 | Petromyzon marinus | ENSPMAG00000008313 |
132908 | Pteropus vampyrus | ENSPVAG00000001431 | 42254 | Sorex araneus | ENSSARG00000004470 |
37347 | Tupaia belangeri | ENSTBEG00000014925 | 9478 | Tarsius syrichta | ENSTSYG00000012587 |
9739 | Tursiops truncatus | ENSTTRG00000010327 | 30538 | Vicugna pacos | ENSVPAG00000004452 |
43179 | Ictidomys tridecemlineatus | ENSSTOG00000000443 | 99883 | Tetraodon nigroviridis | ENSTNIG00000016258 |
31033 | Takifugu rubripes | ENSTRUG00000004822 |
Paralogs | |||
ENSSHAG00000012461 |