Basic Information | |||
Gene ID | ENSXETG00000005746 | ||
Gene Name | sox8 | ||
Full Name | Uncharacterized protein | ||
Organism | Xenopus tropicalis [8364] |
Cross Reference | |||
UniProt | F7A215 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSXETP00000012681 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 103 | 183 | 8.50e-32 | High mobility group box domain |
ENSXETP00000012681 | Pfam | PF00505 | IPR009071 | 105 | 173 | 1.20e-22 | High mobility group box domain |
ENSXETP00000012681 | Pfam | PF12444 | IPR022151 | 17 | 94 | 2.30e-22 | Sox developmental protein N-terminal |
ENSXETP00000012681 | ProSiteProfiles | PS50118 | IPR009071 | 105 | 173 | 0.00e-00 | High mobility group box domain |
ENSXETP00000012681 | SMART | SM00398 | IPR009071 | 104 | 174 | 1.70e-27 | High mobility group box domain |
ENSXETP00000012681 | SUPERFAMILY | SSF47095 | IPR009071 | 89 | 177 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSXETP00000012681 | PF00505 | 5.9e-23 | HMG_box | HMG (high mobility group) box |
ENSXETP00000012681 | PF12444 | 2.3e-22 | Sox_N | Sox developmental protein N terminal |
ENSXETP00000012681 | PF09011 | 8.3e-10 | HMG_box_2 | HMG-box domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSXETP00000012681 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSXETP00000012681 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSXETP00000012681 | GO:0045944 | biological_process | positive regulation of transcription from RNA polymerase II promoter |
ENSXETP00000012681 | GO:0051216 | biological_process | cartilage development |
ENSXETP00000012681 | GO:0005634 | cellular_component | nucleus |
ENSXETP00000012681 | GO:0003677 | molecular_function | DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
10224 | Saccoglossus kowalevskii | 100367276 | 7668 | Strongylocentrotus purpuratus | 581729 |
9103 | Meleagris gallopavo | ENSMGAG00000005341 | 13616 | Monodelphis domestica | 100021633 |
7425 | Nasonia vitripennis | 100121326 | 6087 | Hydra magnipapillata | 100201982 |
9483 | Callithrix jacchus | 100406753 | 7029 | Acyrthosiphon pisum | 100572600 |
61853 | Nomascus leucogenys | 100594481 | 400682 | Amphimedon queenslandica | 100631786 |
30195 | Bombus terrestris | 100649351 | 8128 | Oreochromis niloticus | 100698682 |
132113 | Bombus impatiens | 100746111 | 10029 | Cricetulus griseus | 100774670 |
7463 | Apis florea | 100865918 | 143995 | Megachile rotundata | 100875001 |
34638 | Metaseiulus occidentalis | 100903070 | 9305 | Sarcophilus harrisii | 100927839 |
9555 | Papio anubis | 101005143 | 9595 | Gorilla gorilla | 101138924 |
8083 | Xiphophorus maculatus | 102229521 | 59463 | Myotis lucifugus | 102431224 |
10090 | Mus musculus | 20681 | 10116 | Rattus norvegicus | 302993 |
7227 | Drosophila melanogaster | 45039 | 7460 | Apis mellifera | 727284 |
28377 | Anolis carolinensis | ENSACAG00000006111 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000007508 |
9913 | Bos taurus | ENSBTAG00000020737 | 9615 | Canis familiaris | ENSCAFG00000019601 |
7719 | Ciona intestinalis | ENSCING00000001019 | 10141 | Cavia porcellus | ENSCPOG00000002664 |
51511 | Ciona savignyi | ENSCSAVG00000008424 | 7955 | Danio rerio | ENSDARG00000068019 |
9796 | Equus caballus | ENSECAG00000016320 | 9371 | Echinops telfairi | ENSETEG00000015470 |
9685 | Felis catus | ENSFCAG00000004219 | 69293 | Gasterosteus aculeatus | ENSGACG00000011207 |
9031 | Gallus gallus | ENSGALG00000005263 | 7897 | Latimeria chalumnae | ENSLACG00000016616 |
9785 | Loxodonta africana | ENSLAFG00000010824 | 9315 | Macropus eugenii | ENSMEUG00000004922 |
30608 | Microcebus murinus | ENSMICG00000011516 | 9669 | Mustela putorius furo | ENSMPUG00000015893 |
9258 | Ornithorhynchus anatinus | ENSOANG00000003894 | 30611 | Otolemur garnettii | ENSOGAG00000007992 |
8090 | Oryzias latipes | ENSORLG00000007994 | 9813 | Procavia capensis | ENSPCAG00000012287 |
7757 | Petromyzon marinus | ENSPMAG00000006957 | 13735 | Pelodiscus sinensis | ENSPSIG00000007448 |
9598 | Pan troglodytes | ENSPTRG00000007570 | 132908 | Pteropus vampyrus | ENSPVAG00000014806 |
43179 | Ictidomys tridecemlineatus | ENSSTOG00000008722 | 59729 | Taeniopygia guttata | ENSTGUG00000006856 |
99883 | Tetraodon nigroviridis | ENSTNIG00000009756 | 31033 | Takifugu rubripes | ENSTRUG00000009225 |
9478 | Tarsius syrichta | ENSTSYG00000006321 |