BioWiki
From Bioinformatics.Org Wiki
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This page presents a table of BioWikis, wikis for biologists.
- Usage
- To view more information on a particular BioWiki, just click it's name in the table. To edit data, click the wiki's name and then click the 'edit with form' tab. To add a BioWiki to the table, enter its name below and click 'Add another'. Download the table data (csv format). Questions?
| Name | Year | Description [link] | Pages | New pages | Users | Active users | New edits | Wiki logo |
|---|---|---|---|---|---|---|---|---|
| Bio2RDF | 2024 | Manual for instructions on the download and use of this software [1] | 0 | 0 | 0 | 
| ||
| BioFoundation.Net | 2008 | Doing bio-science and living a biological life can be fun and profitable. [2] | 8 | 0 | 12 | 0 | 0 | 
|
| BioPedia | 2005 | Bio-Pedia is an openfree bioinfomation encyclopedia. [3] | 7,506 | 12 | 1,622 | 13 | 1 | 
|
| BioPerl Wiki | 2005 | A community effort to produce Perl code which is useful in biology. [4] | 2,793 | 0 | 1,665 | 2 | 5 | 
|
| Biocompany.net | 2005 | Biocompany.net is an openfree editable directory of Bio-companies of the world. [5] | 1,544 | 2 | 86 | 2 | 0 | 
|
| Bioinformatics.Org Wiki | 2008 | Serves the scientific and educational needs of bioinformatic practitioners and the general public [6] | 886 | 3 | 1,184 | 11 | 18 | 
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| Bioinformatist.org | 2007 | Instructions for compiling Bioinformatics software from source code [7] | 33 | 0 | 82 | 0 | 0 | 
|
| Biomatics.Org | 2005 | The seamless development of mathematics and computation from a few clearly stated axioms and rules of inference in pure logic as embodied in an atomic/molecular medium [8] | 145 | 55 | 164 | 52 | 5 | 
|
| Biopeople.org | 2008 | Who's Who in biology [9] | 30 | 0 | 1 | 0 | 0 | [[Image:|50px]] |
| Biosophy.org | 2008 | Biologists need philosophy as the first thing in their career [10] | 66 | 22 | 56 | 4 | 45 | 
|
| Biowiki.net | 2008 | A virtual organization and portal to help build openfree hypertext(wiki) sites for all kinds of biology research and development activities. [11] | 10 | 0 | 3 | 0 | 0 | [[Image:|50px]] |
| Brede Wiki | 2009 | Structured information from neuroscience [12] | 3,149 | 59 | 42 | 1 | 142 | 
|
| Bvio | 2006 | The freest knowledge depot on the net. [13] | 1,279 | 21 | 986 | 22 | 1 | 
|
| CCP4 users' wiki | 2008 | CCP4 users' wiki [14] | 82 | 0 | 253 | 1 | 12 | 
|
| CHDWiki | 2006 | For geneticists, clinicians, and molecular biologists working on Congenital Heart Defects [15] | 0 | 0 | 0 | 0 | 0 | 
|
| ConceptWiki.org | 2008 | A semantic wiki for Science [16] | 0 | 0 | 0 | 0 | 0 | 
|
| DrugMet | 2010 | This wiki is part of a project at the bioclipse group at inst. for Pharm Biosc at Uppsala University, to integrate the Bioclipse software with Semantic MediaWiki for integrating, curating and analysing metabolomics (and similar) data. [17] | 15 | 1 | 15 | 
| ||
| EcoliWiki | 2007 | EcoliHub's subsystem for community annotation. [18] | 63,784 | 4 | 747 | 7 | 40 | 
|
| GMOD Wiki | 2007 | Homepage for the the Generic Model Organism Database project [19] | 605 | 5 | 1,194 | 7 | 28 | 
|
| GONUTS | 2007 | GONUTS is a Gene Ontology Normal Usage Tracking System. [20] | 47,456 | 86 | 328 | 50 | 463 | 
|
| Gene Ontology Consortium Wiki | 2006 | There is currently no text in this page. You can search for this page title in other pages, or search the related logs. [21] | 3,684 | 9 | 371 | 28 | 141 | 
|
| Gene Wiki | 2007 | Working towards a review article for every human gene, on Wikipedia [22] | 10,326 | 0 | 3,500 | 0 | 0 | 
|
| Genomics.Org | 2007 | openfree Genomic$.org open hypertext for Everyone [23] | 158 | 0 | 111 | 4 | 4 | 
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| Jmol Wiki | 2006 | This is the homepage for the Jmol Community Wiki. [24] | 0 | 1 | 18 | 
| ||
| MetaBase | 2007 | The database of biological databases. [25] | 3,000 | 0 | 20 | 0 | 0 | 
|
| Metagenes | 2006 | Annotathon, metagenomics [26] | 715 | 0 | 358 | 0 | 0 | 
|
| MyBio | 2006 | MyBio is the biologist's wiki workbench [27] | 802 | 0 | 8 | 5 | 7 | 
|
| NeuroLex | 2008 | the Neuroscience Lexicon [28] | 7,448 | 276 | 113 | 22 | 1,104 | 
|
| NeuroWiki | 2007 | Congress of Neurological Surgeons NeuroWiki [29] | 964 | 1 | 1,056 | 1 | 0 | 
|
| Omics.org | 2008 | [30] | 161 | 1 | 431 | 2 | 1 | 
|
| OpenWetWare | 2005 | Share your science [31] | 17,487 | 325 | 8,452 | 216 | 2,060 | 
|
| PDBWiki | 2007 | A community annotated knowledge base of biological molecular structures. [32] | 64,071 | 0 | 72 | 2 | 2 | 
|
| Proteopedia | 2007 | The free, collaborative 3D encyclopedia of proteins & other molecules [33] | 70,807 | 0 | 925 | 0 | 0 | 
|
| PyMOLWiki | 2005 | The community-run support site for the PyMOL molecular viewer. [34] | 8 | 6 | 53 | 
| ||
| SEQwiki | 2009 | The forum works great for discussions, but not for collaborative editing of resources, hence this wiki. [35] | 41 | 200 | 6,045 | 24 | 803 | 
|
| SNPedia | 2006 | SNPedia is a wiki investigating human genetics [36] | 4,771 | 555 | 469 | 39 | 980 | 
|
| Sajun.Org | 2002 | Sajun is an openfree Korean language general encyclopedia [37] | 1,402 | 39 | 747 | 25 | 12 | 
|
| SubtiWiki | 2008 | A free collaborative resource for the Bacillus community [38] | 4,719 | 3 | 140 | 6 | 224 | 
|
| SubtilisWiki | 2009 | Part of genome-scale tools and approaches to define gene function. [39] | 26,030 | 319 | 13 | 156 | 0 | 
|
| TFe | 2010 | Transcription Factor Encyclopedia [40] | 0 | 0 | 93 | 0 | 0 | 
|
| Topsan | 2006 | Developed to collect, share, and distribute information about protein three-dimensional structures. [41] | 27,002 | 0 | 1,223 | 0 | 0 | 
|
| WikiGenes | 2008 | Search thousands of genes, chemicals, pathologies and much more [42] | 0 | 0 | 0 | 0 | 0 |
|
| WikiPathways | 2007 | WikiPathways is an open, public platform dedicated to the curation of biological pathways by and for the scientific community [43] | 1,348 | 198 | 1,227 | 106 | 246 | 
|
| WikiProject RNA | 2008 | Organize information in articles related to RNA on Wikipedia. [44] | 1,446 | 0 | 17 | 0 | 0 | 
|
| XDSwiki | 2008 | Provide an accurate resource for XDS users, and to provide explanations and hints for the successful use of XDS [45] | 53 | 0 | 55 | 2 | 5 | 
|
| Xenopus Wiki | 2009 | Xenopus Wiki [46] | 126 | 0 | 6 | 0 | 0 | 
|
- Table notes: Year gives the year of the earliest recorded edit in the wiki, Pages gives the number of 'content pages' in the wiki, as defined by the MediaWiki software, New pages, Active users and New edits are all collected over the period of one month at weekly intervals.
Query TBD.
| Extension | Wikis |
|---|---|
| ConfirmEdit | 2424 |
| CategoryTree | 1414 |
| ParserFunctions | 1111 |
| Add Tab Menu | 1010 |
| Add Javascripts | 1010 |
| Draw FckEditor | 1010 |
| Make HTML Tags enable | 1010 |
| Cite | 99 |
| Related Links Management | 88 |
| User Page Setup | 88 |
| Sidebar Management | 88 |
| Recent Changes User | 88 |
| Upload Logo | 88 |
| SpecialInterwiki | 77 |
| Google Analytics Integration | 77 |
| Purge | 77 |
| Administrator Page | 77 |
| Google API | 66 |
| SyntaxHighlight | 66 |
| AddThis API | 66 |
| Renameuser | 55 |
| CharInsert | 55 |
| User Merge and Delete | 55 |
| Sysop IP Manage Setup | 55 |
| Semantic MediaWiki | 55 |
| Auto Authentication For Sysop | 55 |
| SpamBlacklist | 55 |
| Semantic Forms | 44 |
| ProcessCite | 44 |
| Newuserlog | 33 |
| StringFunctions | 33 |
| PagesOnDemand | 33 |
| Contribution Credits | 33 |
| Replace Text | 33 |
| TableEdit:go annotation | 33 |
| GeSHiHighlight | 33 |
| Inputbox | 33 |
| PMID OnDemand | 33 |
| Contribution Scores | 33 |
| Google Site Search 1.2 | 33 |
| RSS feed | 33 |
| PreloadOnDemand | 33 |
| TableEdit | 33 |
| PubMed / Entrez | 33 |
| TreeAndMenu | 33 |
| TableEdit:GoTermLookup | 33 |
| UserRightsList | 33 |
| TableEditLinks | 33 |
| TableEdit:AspectLookup | 33 |
| Gnuplot | 22 |
| … further results | |
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Your suggestions here!
Links
Other lists of biological wikis
- http://en.wikipedia.org/wiki/Portal:Gene_Wiki/Other_Wikis
- http://en.wikipedia.org/wiki/List_of_biological_wikis
- http://wiki.jmol.org/index.php/Wikis_Using_Jmol
- ...
This page has been created with the help of Semantic-MediaWiki!
