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All categories » bioinformatics software development » PyMsXML: Translate MS data to XML
PyMsXML is a python script for converting vendor specific mass
spectrometry data files from their proprietary binary format, to either
of the emerging XML file formats for mass spectra: mzXML or mzData.
License: GNU General Public License
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https://edwardslab.bmcb.georgetown.edu/software/PyMsXML.html
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Latest
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Major update to PyMsXML released.
Highlights:- Output to mzXML version 2.1, 2.2, or 3.0.
- Compression of entire output file (gzip) or mzXML 3.0 peaks (zlib).
- Peak detection of MS and/or MS/MS spectra using vendor libraries.
- Filter scans to select only the ones you want.
- Better support for multiple acquisitions (samples) in single QStar wiff file.
- Reads mzXML file as input.
nathan
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Center for Bioinformatics and Computational Biology
3119 Biomolecular Sciences Bldg. #296
University of Maryland, College Park, MD 20742
Phone: +1 301-405-9901
Email: nedwards[at]umiacs.umd.edu
WWWeb: http://www.umiacs.umd.edu/~nedwards
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