PyMsXML: Translate MS data to XML - Summary

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PyMsXML is a python script for converting vendor specific mass spectrometry data files from their proprietary binary format, to either of the emerging XML file formats for mass spectra: mzXML or mzData.

License: GNU General Public License

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Members Project admins: Nathan Edwards Members: 1 [View all members] Downloads Module name: Scripts Only Latest release is 0.5.4 View: [Release Notes & Changelog] Download: [zip] Module name: Complete Latest release is 0.5.4 View: [Release Notes & Changelog] Download: [zip] [View all files] Latest announcements Submit Archive Subscribe PyMsXML 0.5.0 Released! Submitted by Nathan Edwards; posted on Wednesday, November 08, 2006 Major update to PyMsXML released. Highlights: Output to mzXML version 2.1, 2.2, or 3.0. Compression of entire output file (gzip) or mzXML 3.0 peaks (zlib). Peak detection of MS and/or MS/MS spectra using vendor libraries. Filter scans to select only the ones you want. Better support for multiple acquisitions (samples) in single QStar wiff file. Reads mzXML file as input. Download from bioinformatics.org. nathan - Nathan Edwards, Ph.D. Center for Bioinformatics and Computational Biology 3119 Biomolecular Sciences Bldg. #296 University of Maryland, College Park, MD 20742 Phone: +1 301-405-9901 Email: nedwards[at]umiacs.umd.edu WWWeb: http://www.umiacs.umd.edu/~nedwards Submit Archive Subscribe