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  • PyMsXML: Translate MS data to XML - Summary

    All categories :: bioinformatics software development :: PyMsXML: Translate MS data to XML

    PyMsXML is a python script for converting vendor specific mass spectrometry data files from their proprietary binary format, to either of the emerging XML file formats for mass spectra: mzXML or mzData.

    License: GNU General Public License

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    Project admins: Nathan Edwards

    Members: 1 [View all members]
    Module name: Scripts Only
    Latest release is 0.5.4
    View: [Release Notes & Changelog]
    Download: [zip]
    Module name: Complete
    Latest release is 0.5.4
    View: [Release Notes & Changelog]
    Download: [zip]

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    PyMsXML 0.5.0 Released!
    Submitted by Nathan Edwards; posted on Wednesday, November 08, 2006

    Major update to PyMsXML released.

    • Output to mzXML version 2.1, 2.2, or 3.0.
    • Compression of entire output file (gzip) or mzXML 3.0 peaks (zlib).
    • Peak detection of MS and/or MS/MS spectra using vendor libraries.
    • Filter scans to select only the ones you want.
    • Better support for multiple acquisitions (samples) in single QStar wiff file.
    • Reads mzXML file as input.
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    • -
    Nathan Edwards, Ph.D.
    Center for Bioinformatics and Computational Biology
    3119 Biomolecular Sciences Bldg. #296
    University of Maryland, College Park, MD 20742
    Phone: +1 301-405-9901
    Email: nedwards[at]
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