Basic Information | |||
Gene ID | 100156847 | ||
Gene Name | Six1; SIX1 | ||
Full Name | Six homeobox 1 | ||
Organism | Sus scrofa [9823] |
Cross Reference | |||
UniProt | E5DCJ4 | UniGene | Ssc.15233 |
PDB | NULL | OMIM | NULL |
KEGG | ssc:100156847 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSSSCP00000005467 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 125 | 198 | 1.30e-22 | Homeodomain-like |
ENSSSCP00000005467 | Pfam | PF00046 | IPR001356 | 131 | 180 | 3.40e-14 | Homeobox domain |
ENSSSCP00000005467 | ProSitePatterns | PS00027 | IPR017970 | 157 | 180 | - | Homeobox, conserved site |
ENSSSCP00000005467 | ProSiteProfiles | PS50071 | IPR001356 | 122 | 182 | 0.00e-00 | Homeobox domain |
ENSSSCP00000005467 | SMART | SM00389 | IPR001356 | 125 | 186 | 5.20e-20 | Homeobox domain |
ENSSSCP00000005467 | SUPERFAMILY | SSF46689 | IPR009057 | 122 | 193 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSSSCP00000005467 | PF00046 | 1.3e-14 | Homeobox | Homeobox domain |
ENSSSCP00000005467 | PF05920 | 2.9e-12 | Homeobox_KN | Homeobox KN domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSSSCP00000005467 | GO:0005634 | cellular_component | nucleus |
ENSSSCP00000005467 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
ENSSSCP00000005467 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9986 | Oryctolagus cuniculus | 100349440 | 9646 | Ailuropoda melanoleuca | 100473503 |
400682 | Amphimedon queenslandica | 100639860 | 10029 | Cricetulus griseus | 100770482 |
34638 | Metaseiulus occidentalis | 100900652 | 9597 | Pan paniscus | 100969033 |
9685 | Felis catus | 101081144 | 8083 | Xiphophorus maculatus | 102218611 |
7227 | Drosophila melanogaster | 35662 | 9615 | Canis familiaris | 490719 |
7668 | Strongylocentrotus purpuratus | 576117 | 9544 | Macaca mulatta | 703696 |
28377 | Anolis carolinensis | ENSACAG00000023286 | 9358 | Choloepus hoffmanni | ENSCHOG00000001094 |
10141 | Cavia porcellus | ENSCPOG00000014392 | 9796 | Equus caballus | ENSECAG00000022919 |
9365 | Erinaceus europaeus | ENSEEUG00000013612 | 9371 | Echinops telfairi | ENSETEG00000019169 |
69293 | Gasterosteus aculeatus | ENSGACG00000008432 | 8049 | Gadus morhua | ENSGMOG00000010826 |
9785 | Loxodonta africana | ENSLAFG00000013981 | 9103 | Meleagris gallopavo | ENSMGAG00000013569 |
13616 | Monodelphis domestica | ENSMODG00000008640 | 30611 | Otolemur garnettii | ENSOGAG00000012932 |
42254 | Sorex araneus | ENSSARG00000013256 | 9305 | Sarcophilus harrisii | ENSSHAG00000015711 |
9739 | Tursiops truncatus | ENSTTRG00000013829 | 7029 | Acyrthosiphon pisum | 100160072 |
6087 | Hydra magnipapillata | 100192245 | 10224 | Saccoglossus kowalevskii | 100369568 |
9601 | Pongo abelii | 100447626 | 39432 | Saimiri boliviensis | 101041503 |
31033 | Takifugu rubripes | 101070801 | 9595 | Gorilla gorilla | 101128790 |
8090 | Oryzias latipes | 101175523 | 9669 | Mustela putorius furo | 101689833 |
43179 | Ictidomys tridecemlineatus | 101968713 | 7897 | Latimeria chalumnae | 102350582 |
10116 | Rattus norvegicus | 114634 | 6239 | Caenorhabditis elegans | 191622 |
7070 | Tribolium castaneum | 660875 | 9913 | Bos taurus | ENSBTAG00000012139 |
9361 | Dasypus novemcinctus | ENSDNOG00000018725 | 9031 | Gallus gallus | ENSGALG00000022994 |
9315 | Macropus eugenii | ENSMEUG00000001932 | 30608 | Microcebus murinus | ENSMICG00000003521 |
59463 | Myotis lucifugus | ENSMLUG00000002337 | 8128 | Oreochromis niloticus | ENSONIG00000020117 |
9978 | Ochotona princeps | ENSOPRG00000003825 | 9813 | Procavia capensis | ENSPCAG00000002941 |
7757 | Petromyzon marinus | ENSPMAG00000009968 | 132908 | Pteropus vampyrus | ENSPVAG00000015306 |
37347 | Tupaia belangeri | ENSTBEG00000007513 | 99883 | Tetraodon nigroviridis | ENSTNIG00000017345 |
9478 | Tarsius syrichta | ENSTSYG00000002547 | 8364 | Xenopus tropicalis | ENSXETG00000016943 |
Paralogs | |||
ENSSSCG00000008446 |