Basic Information | |||
Gene ID | 100368004 | ||
Gene Name | LOC100368004 | ||
Full Name | PREDICTED: LIM domain only 4-like [Saccoglossus kowalevskii]. | ||
Organism | Saccoglossus kowalevskii [10224] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_002740222 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 105 | 163 | 3.20e-17 | Zinc finger, LIM-type |
XP_002740222 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 40 | 102 | 2.90e-15 | Zinc finger, LIM-type |
XP_002740222 | Pfam | PF00412 | IPR001781 | 107 | 163 | 1.60e-17 | Zinc finger, LIM-type |
XP_002740222 | Pfam | PF00412 | IPR001781 | 43 | 101 | 5.40e-14 | Zinc finger, LIM-type |
XP_002740222 | ProSitePatterns | PS00478 | IPR001781 | 107 | 142 | - | Zinc finger, LIM-type |
XP_002740222 | ProSitePatterns | PS00478 | IPR001781 | 43 | 77 | - | Zinc finger, LIM-type |
XP_002740222 | ProSiteProfiles | PS50023 | IPR001781 | 105 | 167 | 0.00e-00 | Zinc finger, LIM-type |
XP_002740222 | ProSiteProfiles | PS50023 | IPR001781 | 41 | 103 | 0.00e-00 | Zinc finger, LIM-type |
XP_002740222 | SMART | SM00132 | IPR001781 | 106 | 160 | 2.30e-18 | Zinc finger, LIM-type |
XP_002740222 | SMART | SM00132 | IPR001781 | 42 | 96 | 3.50e-17 | Zinc finger, LIM-type |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_002740222 | PF00412 | 4.4e-32 | LIM | LIM domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_002740222 | GO:0006351 | biological_process | transcription, DNA-templated |
XP_002740222 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
XP_002740222 | GO:0045944 | biological_process | positive regulation of transcription from RNA polymerase II promoter |
XP_002740222 | GO:0005575 | cellular_component | cellular_component |
XP_002740222 | GO:0008270 | molecular_function | zinc ion binding |
XP_002740222 | GO:0046872 | molecular_function | metal ion binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
7425 | Nasonia vitripennis | 100114694 | 8128 | Oreochromis niloticus | 100693821 |
7463 | Apis florea | 100872944 | 7897 | Latimeria chalumnae | 102353832 |
69293 | Gasterosteus aculeatus | ENSGACG00000003456 | 132113 | Bombus impatiens | 100741322 |
8083 | Xiphophorus maculatus | 102229170 | 7668 | Strongylocentrotus purpuratus | 582443 |
7070 | Tribolium castaneum | 661046 | 8049 | Gadus morhua | ENSGMOG00000006361 |