Basic Information | |||
Gene ID | 582443 | ||
Gene Name | LOC582443 | ||
Full Name | PREDICTED: LIM domain transcription factor LMO4-B-like[Strongylocentrotus purpuratus]. | ||
Organism | Strongylocentrotus purpuratus [7668] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_787486 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 120 | 184 | 4.70e-18 | Zinc finger, LIM-type |
XP_787486 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 57 | 119 | 1.60e-13 | Zinc finger, LIM-type |
XP_787486 | Pfam | PF00412 | IPR001781 | 123 | 179 | 2.60e-16 | Zinc finger, LIM-type |
XP_787486 | Pfam | PF00412 | IPR001781 | 59 | 115 | 9.90e-13 | Zinc finger, LIM-type |
XP_787486 | ProSitePatterns | PS00478 | IPR001781 | 123 | 158 | - | Zinc finger, LIM-type |
XP_787486 | ProSitePatterns | PS00478 | IPR001781 | 59 | 93 | - | Zinc finger, LIM-type |
XP_787486 | ProSiteProfiles | PS50023 | IPR001781 | 121 | 183 | 0.00e-00 | Zinc finger, LIM-type |
XP_787486 | ProSiteProfiles | PS50023 | IPR001781 | 57 | 119 | 0.00e-00 | Zinc finger, LIM-type |
XP_787486 | SMART | SM00132 | IPR001781 | 122 | 176 | 4.40e-18 | Zinc finger, LIM-type |
XP_787486 | SMART | SM00132 | IPR001781 | 58 | 112 | 9.30e-17 | Zinc finger, LIM-type |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_787486 | PF00412 | 2e-29 | LIM | LIM domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_787486 | GO:0006351 | biological_process | transcription, DNA-templated |
XP_787486 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
XP_787486 | GO:0045944 | biological_process | positive regulation of transcription from RNA polymerase II promoter |
XP_787486 | GO:0008270 | molecular_function | zinc ion binding |
XP_787486 | GO:0046872 | molecular_function | metal ion binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
7425 | Nasonia vitripennis | 100114694 | 10224 | Saccoglossus kowalevskii | 100368004 |
8128 | Oreochromis niloticus | 100693821 | 132113 | Bombus impatiens | 100741322 |
7463 | Apis florea | 100872944 | 8083 | Xiphophorus maculatus | 102229170 |
7897 | Latimeria chalumnae | 102353832 | 7070 | Tribolium castaneum | 661046 |
69293 | Gasterosteus aculeatus | ENSGACG00000003456 | 8049 | Gadus morhua | ENSGMOG00000006361 |