Basic Information
Gene ID 100392312
Gene Name HMGB1
Full Name High mobility group protein B1
Organism Callithrix jacchus [9483]

Cross Reference
UniProt B0CM99 UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSCJAP00000040230 Gene3D G3DSA:1.10.30.10 IPR009071 8 78 9.50e-30 High mobility group box domain
ENSCJAP00000040230 Gene3D G3DSA:1.10.30.10 IPR009071 93 168 6.60e-32 High mobility group box domain
ENSCJAP00000040230 Pfam PF00505 IPR009071 95 163 3.80e-27 High mobility group box domain
ENSCJAP00000040230 Pfam PF09011 IPR009071 6 78 3.90e-27 High mobility group box domain
ENSCJAP00000040230 ProSitePatterns PS00353 IPR017967 41 52 - HMG box A DNA-binding domain, conserved site
ENSCJAP00000040230 ProSiteProfiles PS50118 IPR009071 95 163 0.00e-00 High mobility group box domain
ENSCJAP00000040230 ProSiteProfiles PS50118 IPR009071 9 79 0.00e-00 High mobility group box domain
ENSCJAP00000040230 SMART SM00398 IPR009071 8 80 2.80e-28 High mobility group box domain
ENSCJAP00000040230 SMART SM00398 IPR009071 94 164 1.30e-32 High mobility group box domain
ENSCJAP00000040230 SUPERFAMILY SSF47095 IPR009071 3 81 0.00e-00 High mobility group box domain
ENSCJAP00000040230 SUPERFAMILY SSF47095 IPR009071 78 164 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSCJAP00000040230 PF09011 2.59941e-42 HMG_box_2 HMG-box domain
ENSCJAP00000040230 PF00505 6.19934e-42 HMG_box HMG (high mobility group) box

Gene Ontology Annotation
Protein Entry Name Space Description
ENSCJAP00000040230 GO:0005634 cellular_component nucleus
ENSCJAP00000040230 GO:0005694 cellular_component chromosome
ENSCJAP00000040230 GO:0003677 molecular_function DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
9796 Equus caballus 100033873 9555 Papio anubis 100137373
9601 Pongo abelii 100461759 9597 Pan paniscus 100971286
39432 Saimiri boliviensis 101045330 43179 Ictidomys tridecemlineatus 101976825
59463 Myotis lucifugus 102420405 10090 Mus musculus 15289
9913 Bos taurus 282691 9823 Sus scrofa 445521
9544 Macaca mulatta 712849 9598 Pan troglodytes 736904
7719 Ciona intestinalis 778643 9358 Choloepus hoffmanni ENSCHOG00000002423
9361 Dasypus novemcinctus ENSDNOG00000012887 9371 Echinops telfairi ENSETEG00000004048
9685 Felis catus ENSFCAG00000000200 9595 Gorilla gorilla ENSGGOG00000025109
9315 Macropus eugenii ENSMEUG00000001380 9986 Oryctolagus cuniculus ENSOCUG00000021335
30611 Otolemur garnettii ENSOGAG00000003205 9978 Ochotona princeps ENSOPRG00000003507
9813 Procavia capensis ENSPCAG00000002201 42254 Sorex araneus ENSSARG00000004470
9305 Sarcophilus harrisii ENSSHAG00000014034 37347 Tupaia belangeri ENSTBEG00000012820
9478 Tarsius syrichta ENSTSYG00000006328 9739 Tursiops truncatus ENSTTRG00000010327
30538 Vicugna pacos ENSVPAG00000004452 10141 Cavia porcellus 100718808
9606 Homo sapiens 3146 51511 Ciona savignyi ENSCSAVG00000000341
30608 Microcebus murinus ENSMICG00000007144 10116 Rattus norvegicus ENSRNOG00000030351

Paralogs
100401463 ENSCJAG00000007095 ENSCJAG00000014197 ENSCJAG00000014214
ENSCJAG00000014991 ENSCJAG00000017053 ENSCJAG00000033322 ENSCJAG00000007419
ENSCJAG00000008378 ENSCJAG00000008384 ENSCJAG00000010744 ENSCJAG00000022832
ENSCJAG00000034265