Basic Information
Gene ID 100534488
Gene Name MyoD1
Full Name Myogenic factor MyoD1
Organism Oreochromis niloticus [8128]

Cross Reference
UniProt D2XRC0 UniGene Oni.44911
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSONIP00000013575 Gene3D G3DSA:4.10.280.10 IPR011598 100 165 2.20e-29 Myc-type, basic helix-loop-helix (bHLH) domain
ENSONIP00000013575 Pfam PF00010 IPR011598 110 161 5.80e-15 Myc-type, basic helix-loop-helix (bHLH) domain
ENSONIP00000013575 Pfam PF01586 IPR002546 6 109 8.40e-27 Myogenic basic muscle-specific protein
ENSONIP00000013575 Pfam PF12232 IPR022032 177 247 4.30e-29 Myogenic determination factor 5
ENSONIP00000013575 ProSiteProfiles PS50888 IPR011598 109 160 0.00e-00 Myc-type, basic helix-loop-helix (bHLH) domain
ENSONIP00000013575 SMART SM00353 IPR011598 115 166 7.20e-18 Myc-type, basic helix-loop-helix (bHLH) domain
ENSONIP00000013575 SMART SM00520 IPR002546 1 114 8.90e-43 Myogenic basic muscle-specific protein
ENSONIP00000013575 SUPERFAMILY SSF47459 IPR011598 109 169 0.00e-00 Myc-type, basic helix-loop-helix (bHLH) domain

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSONIP00000013575 PF12232 4.3e-29 Myf5 Myogenic determination factor 5
ENSONIP00000013575 PF01586 1.4e-28 Basic Myogenic Basic domain
ENSONIP00000013575 PF00010 3.3e-15 HLH Helix-loop-helix DNA-binding domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSONIP00000013575 GO:0006351 biological_process transcription, DNA-templated
ENSONIP00000013575 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSONIP00000013575 GO:0007275 biological_process multicellular organismal development
ENSONIP00000013575 GO:0007517 biological_process muscle organ development
ENSONIP00000013575 GO:0030154 biological_process cell differentiation
ENSONIP00000013575 GO:0043966 biological_process histone H3 acetylation
ENSONIP00000013575 GO:0043967 biological_process histone H4 acetylation
ENSONIP00000013575 GO:0045944 biological_process positive regulation of transcription from RNA polymerase II promoter
ENSONIP00000013575 GO:0071392 biological_process cellular response to estradiol stimulus
ENSONIP00000013575 GO:0005634 cellular_component nucleus
ENSONIP00000013575 GO:0001047 molecular_function core promoter binding
ENSONIP00000013575 GO:0003677 molecular_function DNA binding
ENSONIP00000013575 GO:0031490 molecular_function chromatin DNA binding
ENSONIP00000013575 GO:0046983 molecular_function protein dimerization activity

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
7425 Nasonia vitripennis 100123796 59729 Taeniopygia guttata 100232528
10224 Saccoglossus kowalevskii 100302710 9601 Pongo abelii 100451999
10141 Cavia porcellus 100717629 7463 Apis florea 100867910
143995 Megachile rotundata 100875133 9305 Sarcophilus harrisii 100923982
30611 Otolemur garnettii 100941493 9595 Gorilla gorilla 101130809
43179 Ictidomys tridecemlineatus 101966425 59463 Myotis lucifugus 102419839
7668 Strongylocentrotus purpuratus 373197 9606 Homo sapiens 4654
7719 Ciona intestinalis ENSCING00000007328 9371 Echinops telfairi ENSETEG00000003979
69293 Gasterosteus aculeatus ENSGACG00000008444 9031 Gallus gallus ENSGALG00000006216
7897 Latimeria chalumnae ENSLACG00000014430 9103 Meleagris gallopavo ENSMGAG00000007210
9986 Oryctolagus cuniculus ENSOCUG00000021405 8090 Oryzias latipes ENSORLG00000000694
132908 Pteropus vampyrus ENSPVAG00000012829 10116 Rattus norvegicus ENSRNOG00000011306
42254 Sorex araneus ENSSARG00000002401 37347 Tupaia belangeri ENSTBEG00000003438
8083 Xiphophorus maculatus ENSXMAG00000007430 9597 Pan paniscus 100981988
9555 Papio anubis 101009599 39432 Saimiri boliviensis 101042924
9685 Felis catus 101097667 9669 Mustela putorius furo 101682575
7955 Danio rerio 30513 7227 Drosophila melanogaster 42799
31033 Takifugu rubripes 446036 9615 Canis familiaris 611940
51511 Ciona savignyi ENSCSAVG00000002947 9361 Dasypus novemcinctus ENSDNOG00000017164
8049 Gadus morhua ENSGMOG00000016963 9315 Macropus eugenii ENSMEUG00000014270
30608 Microcebus murinus ENSMICG00000005566 9978 Ochotona princeps ENSOPRG00000002390
9813 Procavia capensis ENSPCAG00000001317 9823 Sus scrofa ENSSSCG00000013375
99883 Tetraodon nigroviridis ENSTNIG00000002808 9739 Tursiops truncatus ENSTTRG00000013869
8364 Xenopus tropicalis ENSXETG00000001320